Pimephales promelas (fathead minnow): 120468035
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Entry
120468035 CDS
T08155
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120468035 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120468035 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120468035 (amfra)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120468035 (amfra)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120468035 (amfra)
Multi subunit type E3
ERAD complex
120468035 (amfra)
LMBR1L-GP78-UBAC2 complex
120468035 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120468035
NCBI-ProteinID:
XP_039512613
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MPLLFLERFPWPSLHTYTALSTVLLAGTILSAYSSVRDSEDSSPLAGDSPSGSDEEIKLD
PLENLGNMATSVLVYLITDTLFVWVMVNTACCILMLIAKVIQCIVFGPLRVSEKQHLKDK
FWNFIFYKFIFIFGVLNVQRVDEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMG
SHVRVLSLLVSVLLCCGGLAVLCAVVGHLHSMHTVAFMAAECLLVTVRTGHVIIRYSIHL
WDLNHQGTWENKSSYIYYTDFIMELTILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIRRHKNYLRVIDNMESRFAVATPEELLANNDDCAICWDSMTSARKLPCGHLFH
NSCLRSWLEQDTSCPTCRMSLNISEGVREREEGQREVLDENMPAGPGAEARPHINQHNHF
FHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLNAMAHQIQEMFPQVPYHLILQDLQ
LTRSVEVTTDNILEGRIQVPFPTQSVERAPLQGNTGPEDSAGASSGSEVAAPEPQDFEVR
GSRFSKSADERQRMLMQRKDELLLRARRRYLHKKPDEGDVFSSADNDDAMPSMEDEDSDS
VTLRRRRMAAAAERRMQRHEPSPF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagcgcttcccctggcccagcttacacacatacactgccctg
agcactgttctgctggctgggaccatcctgagtgcctacagctcggtcagagactcagag
gactcctctcctttggctggagactcacccagcggctctgatgaggagatcaagctggat
ccgctggagaacttggggaacatggccaccagtgtgcttgtctatctcatcacggacacc
ctgtttgtctgggtgatggtgaacacggcatgctgcatcctcatgttgatcgctaaagtg
atccagtgcattgtgttcggcccgctgagagtgagtgagaaacagcatctgaaagataag
ttctggaacttcatcttctacaagttcatcttcatcttcggcgtgctgaacgtgcagcgg
gtggacgaggtggtgctgtggtgtctgtggttctccatgctcatcttcctgcatctgatg
gtgcagctctgcaaagaccgctttgaatacctctcgttctctcccacgaccccgatgggc
agtcacgtgcgcgtgttgtctctgctggtgtctgtgctgctgtgctgtgggggtctagct
gtgctctgcgctgtagtcgggcatcttcacagcatgcacactgtggccttcatggcagcg
gagtgtttgctggtgaccgtacgcacaggacacgtcatcatacggtactccattcacctg
tgggacctcaaccaccagggcacctgggagaacaagagctcatacatctactacactgac
ttcatcatggagttgaccatcctctgcctggacctgatgcatcacatccatatgctgctc
tttggaaacatctggttgtccatggctagtcttgtgatctttatgcagctgcggtatctc
tttcacgaggtgcagcgaaggattcgccgccacaaaaactacttgcgtgtcattgacaat
atggaatccaggtttgctgtggcaacgcctgaagagctgttggctaataacgatgactgt
gcgatctgctgggattcaatgactagtgcgcgcaagctgccctgtggacatctcttccac
aattcgtgtctgcgctcttggctggagcaggacacgtcctgtcccacgtgccgcatgtct
ctgaacatcagtgaaggcgtgcgagagcgagaggagggccagagggaggtgctggatgag
aacatgcctgctgggccaggagcagaggcccgaccacacatcaaccagcacaatcacttc
ttccactttgatgggtcccgcattgccagctggctgccgagtttctcagtggaggtcatg
cacaccaccaacatcctgggcatcgcacaggccaacaactcccagctcaatgccatggcc
catcagatccaggaaatgtttccacaagtcccttatcatctgatcctgcaggatttgcag
ctcacacgctctgtagaggtcaccactgataacatcctggagggccggatacaggtgcct
ttcccaacacagtctgtggagcgcgcacccctccagggcaacactggacctgaggattca
gcaggggccagcagcgggtcagaggtcgcggcccctgagccgcaagacttcgaggttcgt
gggagccgcttctccaagtctgcggatgaaaggcagaggatgctcatgcagaggaaggat
gagctgctcctgagagcgcgcagacgatatcttcacaaaaagccggatgaaggggatgtg
ttttcttctgctgataatgatgacgccatgccctcgatggaggacgaggactctgactct
gtgacgctgcggcgcaggaggatggcggccgctgcggagcgacgcatgcagagacacgag
ccctccccgttctga
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