Pimephales promelas (fathead minnow): 120468071
Help
Entry
120468071 CDS
T08155
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120468071 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120468071 (nup160)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120468071 (nup160)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120468071 (nup160)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120468071 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
TPR_Nup160_C
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
120468071
NCBI-ProteinID:
XP_039512655
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MAGVLERSYIEICGFERETVSRFRHITLNLAGVGVSSGGVKYADSAGGFSYEDSGKLLSV
ASNRFIHWSTSGDTVQFVEQSLDTNLLNNAVRLRIPHCLLLPGGVFIQETLNNVLILIVT
SQSVHRLVLPHPSRMYHSDLVTELQMQSIFTDIGKLNLNEPAHSYVLPFAQGTHSTSPST
SAAWISHQGEALFALASPSGSIIIVTLPPHDQDGAVSILELKQSSMMQRLAGWMPTAIRG
DPSTSDVAISLAVHQLEDDTFVFALCQDHKLRMWSFKHQMCLLVTDMLEYMPVGRGDVKV
SPAQAHKLRIFFSSSIGLCLAVYLAVPKRSQFCVLQLVANENNRYSLDHISTLFSTQETV
VDFVLTATDIWAVWLDNDNQTMVKYISFEHNTTGMWNQVFVQPSPEEEVQIGEDQDPREI
YLDVLFSPLRFTASAIIKALQIYKRGTERYSDLSWEDLKKEVTVAVENELQSSVTEYEFC
QEDYRLLQVEFWSKFYACCVQYQDVLSTPLALHVSPSTAMVCVLKKGFVSFLLPCFAVDH
LYLSSDEYLFSEEETTIAEDLDVSRDVLQLVQCLRLVNESLPEDLAYEMEKALDDLLSPE
KVSEKILDSLLASEVNVIQEIENKLQDIFNPIVAMNTLLRELDLEADAETDTRPTGQSLR
VRISLSQLYGSSVAASLICQAVCQTAMTRTLLCRDLLILQQLYLRNGDNVFLAGGNQLLQ
LQQDLIPRCSNLLCTYHLLKQMSLTLSSSVPLDILNADLQHLSVLELSDSMTPTSNRSVL
NPQTVVELFYQNVARKAIMSQIFSQQDLEGNQNMLHWPQMISSVLTLLCQFLWPSNPSFL
FPECLMGNCQYAQLQEYVRLVGSWCQVNVGSYRFVLGQCYLSSGEGQKALQCFQEAATEV
DKEEFLIKLTGSHEETAVTAPRLLYYNKVLRLLEDICLPELVINLATLAISEAANDERSQ
AALWTRIFKHHLDLGHNSQAYEALTQNPDPSRQLDCLRQLVVVLCERAQLRDLIQFPFVN
LHDEVVSIIESRARAVDLMTHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTLRG
LQKQVNCYLAALNCLRLVHPDYAWIVQPSSGAAYERPGASPKRNYDGEFAASPVNQQIDI
LELKDLEKEYVLARSRLTLAQQDPPSAAIAGGASSQEMVALLVQTGLFDTSLTLCQTFNL
SLTPVFEGLTFKCIKLQYKGDQDQTEVWNWLAANQLPTIITTKESSATDEAWRLLAHYLE
KYPSQNAQYHRSVINKLLSHGVPVPDWLINAYKVGCCCFLGFFSA
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgttctggagaggagttacattgagatatgcggttttgaaagagagactgtc
tcacggttcagacacataacactgaatctagcaggtgttggagtaagctctggcggtgtg
aagtatgcagacagtgctggtggattctcctatgaggacagtgggaaactcctctcagtg
gccagtaacagattcatccactggtccacttcaggtgacactgttcagtttgttgagcag
tcgctggacactaatcttctgaataatgctgtccgcttgcgtatcccacattgcctcttg
ctgcctggaggagtttttatacaagagacccttaacaacgtcctcattctgatcgtcacc
agccaatctgtccatcgcctggttctgccgcacccctctcgcatgtaccacagtgatctg
gtcactgaactccagatgcagtccattttcacagacattgggaagctgaatttaaatgag
ccagcccacagttatgtgctcccgtttgcacagggaacacactcgacctctccgtccaca
tctgccgcctggatcagtcatcaaggggaagctctctttgctcttgcctcaccgtcaggc
agcattattatagtcacgttacctccccacgatcaagatggggctgtgtcaattctggag
ttgaaacagagttcgatgatgcagcgattggccggctggatgcctactgctatcagggga
gatccgagcacctctgatgtagccatcagtctggctgtccaccagctagaggacgacacg
tttgtattcgcgctgtgtcaagatcataagctgcggatgtggtcatttaagcatcagatg
tgcctgttggtgactgacatgctggagtatatgcccgtgggtcgtggggatgtaaaggtt
tctccagctcaagctcataagctccgaatcttcttctcctcatccatcggtctgtgtctc
gccgtctacctcgcagttcccaaacgcagtcagttctgtgtgctgcagctggtggccaat
gagaacaatcgctacagcctggatcacatctcaacactgttctcaacacaggagacggta
gtggattttgtcttgacggcaactgatatttgggctgtttggctggataatgacaaccag
actatggtgaagtacatcagttttgagcataacacaacaggcatgtggaaccaggtgttt
gtccagccatcaccagaggaggaagttcagattggtgaagaccaagacccacgggaaatc
tatcttgatgtacttttttcaccactgcgcttcacagcctcagccatcattaaagctcta
cagatttacaagcgaggtacagagcgatattctgacttatcatgggaggatctgaagaaa
gaggtcactgtcgcagtggaaaatgagcttcagtccagtgtgaccgagtacgagttctgt
caggaagactaccgcttgctacaggtggagttctggtcgaagttttacgcatgttgcgta
cagtaccaggacgttctgtccacgccactcgccctgcatgtgagcccttccacagccatg
gtctgcgttctcaagaagggctttgtgtctttcctattaccctgctttgcagtcgaccat
ctttacctctcctcggatgaatacctgttttctgaagaggagactacaattgctgaggac
ttggatgtgagccgtgacgtcttgcagctggttcagtgtctgcgcctggtgaatgagtct
cttccagaggacttggcctatgagatggagaaagccctcgatgacctactgtctccagag
aaagtgtcagagaaaatactggacagtcttctggccagcgaggtgaatgtaattcaggag
attgaaaacaaactgcaagacatctttaaccccattgttgccatgaacacactcctccga
gaactggaccttgaagctgatgcagagacggacaccagacctactggtcagtctctgaga
gtgcgtattagtctctctcagctgtacggcagcagtgtggcggctagtctgatctgtcaa
gctgtgtgccagactgccatgacccgaactctcctctgcagagatctgcttatcctgcag
caactctacctgcgaaatggagacaatgtgtttcttgcaggcggtaatcagttactgcag
ctgcagcaagacttgattcctcgatgctctaatctgctttgcacatatcatctactcaaa
cagatgagcttgacgctttcctcatccgtcccactggacatactaaatgctgatcttcaa
catctgtctgttctggagctgtctgactcaatgactcctacttccaacagatcagtgttg
aatcctcaaactgttgtggagttgttctaccagaatgtggcccgtaaagccatcatgtct
cagatcttctcccagcaggatttggagggcaaccagaacatgttgcactggccacagatg
atctccagtgtcctgacactactctgtcagttcctctggcccagcaatcccagtttcctc
ttccctgaatgcctgatgggaaactgccaatatgcacaactgcaggaatatgttcgatta
gttgggtcctggtgccaggtgaatgtgggatcctatcgttttgttttgggtcaatgctat
ctgtccagtggtgaggggcaaaaggcattgcagtgtttccaggaagcagccactgaagtg
gataaagaagagtttttaattaaactcacgggttcacatgaggagacagccgtgaccgcc
ccacgattactttattacaacaaggttttacggttattggaggatatttgtttgcctgag
cttgtgatcaatttggcaacgctggccatatctgaagctgctaatgacgagagaagccag
gctgctctgtggactcgtatattcaagcatcatctggatcttggacacaatagtcaggca
tatgaggccctgacacaaaaccctgatcctagcaggcagctggactgtctccgacagctg
gtggtggtgctgtgcgagcgcgctcaactcagggatcttatccagttcccatttgttaat
ttacatgatgaggtggtcagcattattgagtctcgcgcaagagctgtggacctcatgact
cacaactattatgagcttctatatgctttccatatcaatcgtcacaactatagaaaagcc
ggtacagtgatgtttgagtacggcatgcgtctgggccgtgaggtgcgaactctccgtggt
ctccagaaacaggtcaactgttacctcgctgccctcaactgcctgcgtcttgttcatccg
gactatgcttggattgtgcagccctcttctggagcagcgtatgaacgaccaggcgcatca
ccaaaaaggaactatgatggtgaatttgctgcaagtccagtaaatcaacagattgacatt
cttgagctgaaagacttggagaaagagtatgttcttgcccggagtcgtctaacgttagca
caacaggaccccccctcagcagctatcgcaggaggtgcgtcttcacaagagatggttgcc
ctgcttgtccaaacaggtctttttgacacatccctgacgctgtgtcagacctttaactta
tcccttacacccgtctttgagggactgacattcaagtgtatcaaactgcaatataaaggt
gatcaggaccagacagaggtgtggaactggcttgctgccaatcagctgccaactattatt
actactaaagagtccagcgcaacagatgaagcttggcggcttttagctcattatttggag
aagtatccctcacagaatgctcaatatcaccgttctgtcatcaacaagctgctgtcacat
ggagtgccagtgcctgattggctgatcaatgcctacaaggttggttgctgttgttttttg
gggtttttttcagcatga
DBGET
integrated database retrieval system
