Pimephales promelas (fathead minnow): 120468235
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Entry
120468235 CDS
T08155
Symbol
srebf2
Name
(RefSeq) sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120468235 (srebf2)
04131 Membrane trafficking [BR:
pprm04131
]
120468235 (srebf2)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
120468235 (srebf2)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120468235 (srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120468235
NCBI-ProteinID:
XP_039512857
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MDASEFMDTMDPSLAELGDEFTLGDIDEMLQFVSNQGDFPDLFEDQMGGGSVAPVRPLPL
TAPSAILTPPHTPVQTSSQTHTQTQIQAQTQTHTQTQIHTRTPPLLQPRPQPITQVQTFP
MQTLAVQTQAQPQTVMLTSTPNPSRFIQNQVICQQNHGTGFQVLQPQMQSIMTSPQVQPM
TIQHQRVLTSTGQTIQTLSTTPMHTMSPLLVHQPQILKTDSLVLTTLKPDGTQVLSTVQN
PAGITTLTAPLQTTALQVPTLMSSNILTTVPMVMGGGDKLPIKQLSSGTTHTGGGARVVL
DQGLAVTTGPGGVVKEGERRTTHNIIEKRYRSSINDKILELRDLVMGNDAKMHKSGVLRK
AIDYIKYLQQVNHKLRQENLALKMSSQKNKSVCVSDDLDLKPETPFISPPPSDSGSSSPA
QLSPFCLDSEPGSPLTEHEQVKSEPDSPSSVGVMDRSRLLLCALTFLCLSLNPLPSLLHA
DEDRALSTAHGASRSLFSLPGHTQGFGAWLPWFLVWLLSGVGVVWGCVRVLYLWEPVTPL
HSPTSVRFWRQRKQADLQLYRGDYAAAVASLQTCLSALSRVLPSSTLDIMCSLSWNLIRF
CLRRPAPLGWLLRLVGGRHEGEESQTSSRDAALVYHKLSQLQLTGKMERRPLWGVCVSLS
AVNLTESAEGKMSVTQKIQIYVTAAISLRSALGKHLSCVPGYLLSCAEALACQSDAKPLP
LDAKLLPDCLRWIFTPLGRQFFLSCDWSVRSESSEQVFTSQRDEADPIAQLHRCFCEKLL
ERAVHTLIEPQSSKHAEDAGEFTGVLEFLQLLNSCTEDSAPSTAPFPALANQNSASVRDP
VCRWWASVLKAAVHWLQGDDASVRSLLVEAERMPRALHTLDPPLPKAVLALCKAVQMSVC
PQKGEGVVSCLSHCQRASAHLHISVCQSHNNTWLHKGVELLVCDLLLTLRTSLWQRGGGS
NGEPGPAPGSQLAGFQRDLSSLRKLGQAHRQAQHKLFLHETTVRLMAGASPTRTHQLLRH
RTHNYTTAAAGGERERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGDRRSLQD
CQQILIRLGGGTTIAAT
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctgagttcatggacacgatggacccgagcttagccgaactgggcgatgag
ttcacactgggagacatcgacgagatgctgcagttcgtcagtaatcagggggatttcccg
gatctctttgaggatcagatggggggcggatctgtggcccccgtgaggcccctcccactg
acggcccccagcgccatcctgacccccccacacacacctgtgcagaccagcagccagaca
cacacacagacgcagatacaggcacagactcagacacacacgcagacgcagatacacacg
cgcacaccgccgctgctgcagcctcgaccccagcccatcacacaggtgcagacgttcccc
atgcagacgctggctgtgcagacgcaggcgcagccgcagacggtgatgctcacgtcgacc
cccaacccgtcccgattcatccagaaccaggtgatctgccagcagaaccacggcacgggc
ttccaggtcctccagccgcagatgcagagcatcatgacatcaccgcaggtccagccaatg
acgatccagcaccagcgtgtgttgacttcgaccggtcagaccatccagacgctgtccacg
acgcccatgcacaccatgtccccactgctggtgcaccagcctcagatcctgaagacggac
tctctggtgctgaccacactgaagccggacgggacgcaggttctgtcgaccgtgcagaac
cccgcgggcatcacgaccctcaccgcgcccctccagaccaccgccctgcaggttcctacg
ctgatgagcagcaacatcctgaccaccgttcccatggtgatggggggcggagacaagctg
ccaatcaagcagctgtcgtcgggcaccacccatacggggggcggagccagggtggtcctg
gatcagggattggctgttaccacaggaccgggaggagtcgtgaaagagggcgagcgacgc
acgacacacaacatcatcgagaagcgctaccgctcgtccatcaacgacaagatcctggag
ctgcgcgacctcgtcatgggcaacgacgccaagatgcataagtcaggtgttctgcgcaaa
gccatcgactacatcaagtacctgcagcaggtgaaccacaagctccggcaggagaacctg
gcgctgaagatgagcagccagaagaacaagtctgtgtgtgtgtctgatgatctggacctg
aagcctgagacgccgttcatctctcctcctccgtcagactcgggctccagttctcccgct
cagctctcgcccttctgcctcgactctgagccggggagtccgctgacggagcacgagcag
gtgaagagcgagccggactcgccctcgtcagtgggagtgatggaccgctcgcggctgctg
ctgtgcgcgctcaccttcctctgcctgtcactcaacccgctgccgtcgctgctgcacgcc
gacgaggaccgggctctgagcaccgcccacggggcctcacgctccctcttctccctgccc
ggacacacacagggcttcggggcgtggctgccatggttcctggtgtggctgctgagcggg
gtgggcgtggtctgggggtgtgtccgagtgctgtacctgtgggagccggtcacgcccctt
cactcgcccacctcagtgcgcttctggagacagcggaaacaggccgacctgcagctctac
cggggcgattacgcggccgctgttgcgagtctgcagacgtgtctgtccgcgttatccaga
gtcctgccctcctccacactcgacatcatgtgctcgctctcctggaacctgattcgcttc
tgcctgcggaggcccgcccccctgggctggctgctgcgtctggttggaggacggcacgag
ggggaggagtcacagaccagctcccgggacgcagcgctggtgtatcacaaactcagccag
ctgcagctcacaggtaagatggagcggcgtccgctgtggggagtgtgtgtgtctctgagc
gcagtgaatctgacggagagcgctgaggggaagatgtctgtgactcagaagatccagatc
tacgtgacggccgccatcagcctgagatcagctctggggaaacacctcagctgtgtgccc
ggttatttgttaagctgtgctgaggcactggcctgtcaatcagatgctaagcccctccca
ctggacgctaagctcctcccagactgcctgcgctggatcttcacaccattgggccgccag
tttttcctgagctgtgattggtcggtgaggtccgaaagcagcgagcaggtgttcacctct
cagagagatgaagcggatcccatcgcacaactgcaccgctgcttctgcgagaaactcctg
gagagggccgtacacacactgatcgagccgcagagcagcaaacacgctgaggatgctggg
gagtttactggtgtgttggagttcctgcagctgttgaacagctgcactgaagactccgcc
ccctcaaccgcccctttccccgcactggccaatcagaactcagcctcagtgagggacccc
gtgtgccgctggtgggcgtcggtcctcaaggctgcggttcattggctgcagggtgatgat
gcgtcggtgaggtcactgctggtggaggcggagcggatgccgcgagcgcttcacacgcta
gatcccccgctgcccaaggccgtgctggcgctgtgtaaggcggtgcagatgagtgtgtgt
ccgcagaagggcgagggagtcgtgagctgcctcagtcactgtcagcgcgccagtgctcac
ctgcacatcagtgtgtgtcagtcgcacaacaacacctggctccacaagggggtggagctt
ctggtctgtgacctcctcctgactctgagaacaagcctatggcagcgcgggggcgggtcc
aatggagagcccggccccgcccccggatcccaactggctggattccaaagggacctgagc
tctttgcggaagctcggacaagcccacagacaggcccagcacaagctgttcctgcacgag
acgacggtcaggctgatggcaggagccagtcccactcgcacacaccagctgctgcgacac
agaacacacaactacacaacagcagccgccggcggcgagcgcgagagagctcatgctatc
ctgctagcgtgtcgtcacctgccgctgccgctgctaacgccaccgggtcaccgagctcga
ctgctggccgaagccaagcgcacgctggagagagtgggggaccggcgctcactgcaggac
tgccagcagatactgatacgcctgggggggggcaccaccatcgccgcgacataa
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