Pimephales promelas (fathead minnow): 120468282
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Entry
120468282 CDS
T08155
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120468282 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120468282 (lama4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120468282
NCBI-ProteinID:
XP_039512934
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MASLLLGSIGVLYILSALTHTASSQQLNTVYRVCARGFFLNDRETCLPCNCKGHADSCED
ITGICIGCQDHAIGDFCEHCEDGFLPVLLPDGTFMCRPCACPISLESNNFADYCDKRGNF
LRCVCQEGYAGHYCERCAPGYYGNPMEVGNSCKKCDCNGNSDPNLIFNECNNMTGQCLNC
WANTAGDNCERCAPGFYGEAISAKDCRECQCNKCGTASCDDRTGVCHCKPGVTGHLCDRC
EEGYSGFGSCMGCRRCECASAALRGTCHPLTHSCQCHPGAGGRYCERCLPGFWDYSTSGC
KKCDCPEENCDMHTGECLPEASQISECNIDCDACIWNLIGDIRQSNKTLDQVRNSVLNIS
TGAAANDRLKYYNYTAHRLQAQFVGWRSKYTVMRADTGHLEEETQKRLTDMELLAGEEES
VQSLGERVDQETLDSSTLANTLIANLSSLNILIEDMIRDWELYGVHQELNPQVKLQKIAE
AERILGWMRNMDLSPKEPLATDESSEAHELLRRVRHFEKTLMTTQGRLLPMREVLSRFTS
RLFQAQDLLNKADDTLQLSLDKYKTNQLNLQRREAQQQRLNDIHDIVNQTIVTAGVIVSE
ANLTVLEVEDMITNVRKQHAEIDGARVSLERKTEKLSQSDKELVLRAEDHADDLLRHAEE
LKYNLKGSDANGRVQKALNALNVYDNIVKNIDNANITGLTALNISSTTHTDIDGLNAKLS
LMRSQSDSVLTEASTLYYQQKDIVSTVLDNKKYIEETNEMMVNSSKKIAKILSDINAIHK
DRTARRLQFTHEVAEGTLNRSAEVLQKVTPILKRVEEWDGNMKKEAYSAAAFDRTVLSAG
EAVKDLSEIVPELLDKLRVVEEKKPVNNVSTNIIKIRELIAQARSVAKKVQVSMKFNGQS
AVEVQPYSNLDELKAVTSISFYIRVDPDKDPIEDRFLLYLGDKQGRKDYMGLAIKNDNLV
YVYNLGGEDVEIPLSSKPVSSWPPVFNLVKVERLGRHGKVFLTVPSQDTTAEQKFIQKGE
GAGTDSMFDLDPKDNIFIVGGVPPDVKIPPALSLAPFVGCIELETLNSDIISLYNFKQLH
KMDVAASVPCPRHKLAFSQSRVTSYLFDGSGFALVNKIERRGKIGIVTRFDIEVRTVANN
GILFLMVNETNFFVLELKNGFLRLMYDFGFTNGPVVMESNLAKLQINDARYHEVSVIYHH
SKKIILLVDRSHVKSLESEKKPLPFSDIYIGGAPSSILLSRPELSSLVGLKGCVKGFQFQ
KKDFNLLEEPGTIGISSGCPEESFMSRTAYFTGEGYLGSTAKISPFQSFEGGLNFRTLQS
NGLLFYHRDGLDEFSLSLENGAVVLQSKGTRVKSHKKNYNDGRTHFLVASVTDQKYELII
DDKDKLEKKKPASTSQSDNVPKTFYYGGSPTSSTQNFTGCISYAYISRQDRDIEPEDFQR
YSENVQASLQDCPVERPPSALLNKENRESSRRSPGHSRKVGRDESSLPLGNPLDVPETET
APCYLSSHPRVTRHAHRYGGSAHSRQEYTGVASVIRDKSHFSLSLKTQSAFGLIFYMADE
SEENFMALFLTHGRLVFTFSSGKDQVRVRSKEKYSDGQWHDIIFIRSGNMGRLMIDGLTV
LEDRASGGNISMLVVQDPLYVGGVPPDQAIKNIQKTSVSSFSGCMRRLQLNGRWLTSASS
SFGVTPCYEGPSEPGTYFTEEGGYVLLDDSFDLGSRFKLVMEVRPRVASGVLLHVFTGEK
EYLTLYIYQSQVVVVVSNGIREFSTYVSPTEEICDGSWHKITVIRDGPTVQLDVDSEVSH
VMASVREPAQMSDAPVFLGGAPASMLSPSLLSRRGYTGCMRSVSVNESPVSFSAAALVSG
AVDVGSCPAA
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctgctcttgggatctatcggcgttctctacatcttgtcagcactcacacat
acagcttcatcgcaacagttgaacacagtctacagggtatgtgctcgaggattcttcctg
aatgatcgtgaaacctgtctcccctgtaactgtaaaggccatgctgatagctgtgaggat
atcactgggatatgcattggatgtcaggatcacgctattggagatttctgtgagcactgt
gaagatggatttttacccgtgcttcttcctgatggcacattcatgtgtagaccatgtgcc
tgcccgatatcactagagtctaacaactttgcagattactgtgataagaggggtaatttt
ctgagatgtgtgtgccaggaaggatatgctggacactactgcgagagatgtgctccaggt
tattatggcaatcccatggaggtgggcaattcctgcaaaaagtgtgattgtaatggcaac
tcagacccaaaccttatcttcaatgaatgcaataatatgacaggccagtgcctgaactgc
tgggcaaacaccgctggtgacaactgtgaaagatgtgctccgggtttctatggtgaagcc
atcagtgctaaggactgtcgggagtgtcagtgcaacaagtgtggaacggcatcatgtgat
gaccggacaggtgtgtgtcactgtaagcctggggtcacaggtcacctatgtgacaggtgt
gaggagggttactctggctttggcagctgtatgggatgccgtcggtgtgaatgtgcctct
gctgccctgcgtggcacctgccaccctctcacacacagctgccagtgccacccgggggct
ggaggccgatactgcgagcgatgcctgccaggattctgggattacagcacatccggctgc
aagaaatgtgattgcccagaggagaattgtgacatgcacacaggagagtgtcttcccgag
gcctcgcaaatcagcgagtgtaatatcgactgcgatgcgtgtatttggaatctgattgga
gatattcgtcagtccaacaaaaccttggaccaagttaggaacagcgtgctgaacatttct
acaggagctgcggccaacgacagattaaagtactacaactacactgcacacagactacag
gctcagtttgtaggctggagaagtaagtatacagtgatgagagcagatacgggacacctg
gaggaagaaactcaaaaacgacttactgacatggaactgctcgcaggagaggaggaatca
gtgcagtcattgggagagcgggtggatcaagagacacttgacagctccacgcttgcaaat
acactcattgctaacctctcttccctcaatattctcatagaagatatgattagggattgg
gaattatacggtgtccatcaggagttaaatcctcaggtaaagctgcagaaaatagcagaa
gccgaacggatcttaggctggatgagaaatatggacctctcacccaaagaaccgcttgca
actgacgagtcctccgaggcccatgaattgctccggcgtgtgcgccattttgagaaaact
ctgatgactactcaggggcgtctgttgcctatgcgggaagtgctgagtcgattcacttcc
agactctttcaagctcaggatctcctcaacaaagctgatgatacactgcagctgtctcta
gacaaatacaagaccaaccagctcaatttacagaggagagaggcacagcagcaacgacta
aacgacatccatgacattgtcaatcaaactattgttacggctggtgtaatcgtctctgag
gcaaacctgactgtcctcgaagtggaagatatgatcacgaatgtgagaaaacagcatgca
gaaatcgatggggctcgtgtgtcactggagagaaagacagagaaattgtctcagtcagac
aaagaactagttctgagagcagaggatcacgctgatgatctgctgagacatgctgaagaa
cttaagtataacctgaaaggaagcgatgcaaatggacgagtgcagaaagccctgaacgcc
ttgaatgtgtatgacaatatcgtcaaaaacattgataacgctaacatcactggcctgact
gctctcaacatctccagcactacacataccgacattgacggattaaacgctaaactgagc
ctcatgcgctctcagagtgacagcgtgttaacagaggcctcaaccctgtactatcagcag
aaagacattgtatccacagtcctcgacaataagaaatacatcgaagagaccaatgagatg
atggttaactcctctaaaaaaatagctaagatcctcagtgacatcaatgcaattcataaa
gaccggactgcgagacgtctgcagttcactcatgaagtggccgaggggactctgaaccgc
tctgctgaagtgctgcagaaagtgacacccatcttgaagagagtggaggagtgggacggc
aacatgaaaaaggaggcgtattctgccgcagcgtttgaccgcactgttctgtctgccggc
gaggccgttaaggatctgtcagagatcgtgccagagctacttgacaagctgcgtgtggtt
gaagagaaaaaacctgtgaataatgtctccacaaacatcataaaaatcagagaactcatc
gcacaggcccgcagtgtggcgaagaaggtgcaagtctcaatgaagtttaacggccagtct
gccgttgaggttcaaccctactccaacctagacgagctgaaggcggtcacgtccatcagt
ttctacatcagagtggacccagacaaagacccaatagaggatcgcttcctactgtacctc
ggagacaagcagggtcgtaaggactacatgggactggccataaagaacgataatcttgtt
tatgtgtacaatctgggaggagaggacgtggagattccactcagttcaaagccggtcagc
tcctggcctcctgtcttcaatcttgttaaagtggagaggttgggacgccatggtaaagtg
ttcctgacggtcccgagtcaagacaccacagcagagcagaagttcatccagaaaggagag
ggggctgggacagactccatgtttgaccttgaccctaaagacaatattttcattgtagga
ggagttcctcctgatgtgaagattcctccagctttaagcttggctccttttgttggatgc
atcgagttagagactttgaacagtgatatcatcagtctgtacaactttaaacagcttcac
aaaatggatgttgccgcatcagtgccttgtcccaggcataagttggctttctctcagagt
cgtgtgacaagttatttgtttgatggcagcggctttgctttagtcaacaagattgagaga
agaggcaaaattggcattgttactcgatttgatatcgaagttcgtactgttgccaacaac
ggcattctattcctcatggtcaatgagacaaattttttcgtgctggagctgaaaaatgga
tttctccgcctgatgtacgactttggtttcactaatggtcctgtcgtcatggagagtaac
ttggccaaactccagatcaacgatgcgcgatatcatgaggtgtctgtgatctatcatcac
tctaagaaaatcattctgctagtggacagaagccatgtcaagtccttggaaagtgaaaag
aaacccttaccattctctgatatctatattggaggagctccttctagcattctgctctcg
aggccagaactgtcatccctggtgggattgaagggttgtgtgaagggcttccagttccag
aaaaaggacttcaatctcttggaggagccaggaaccattggtatcagcagtggctgtcct
gaggaatcatttatgtcccgtacggcctatttcacgggagaaggctatctgggctctaca
gctaaaatctcaccattccagtcttttgagggaggactaaacttcagaacactacagtcc
aatggactcctattctaccacagagatgggttggatgagttttctctctcattggagaat
ggtgcagtggtgctccagtccaagggaaccagagtcaaatcacataagaagaattacaat
gatggacggacccatttcttagttgcctcagtgaccgaccagaagtatgaacttataatt
gatgacaaagacaagctggaaaagaagaagccggcttccacgtctcagtcagataacgtc
ccaaagaccttctactatggaggctctcctacgagttccacacaaaatttcacggggtgc
atcagttatgcttacattagcaggcaggatagagatatagagccagaagacttccaacgt
tacagtgagaatgtgcaggcgtcgctacaggactgcccggtggaaagacccccttctgct
ttgctcaacaaagaaaacagagagtcctctagacgaagtccaggacactcccgcaaggtg
ggcagggatgagtccagcctaccactcggcaatcctttggatgttccagagacagaaact
gctccctgttacctgtcctcccacccacgagtgacccgtcacgcccatcgctatggcgga
tcagcccacagccgacaagagtacacgggtgttgccagtgttatcagagataaatctcac
ttttctctatctctgaaaactcaatcagcattcggtctcatcttctacatggctgacgag
tctgaggagaacttcatggctctgttcctcacacatggaagactggtattcacattcagt
tcagggaaagaccaagtcagagtccgatccaaagagaagtacagtgacggacagtggcat
gatattatcttcatcagaagtggaaatatgggcagactgatgattgacggtcttacggta
ttagaggacagagcttcgggcggaaacatctcaatgcttgttgtccaggatcctctgtat
gtcggcggtgtgccacctgatcaggcgattaaaaacattcagaagacgtctgtgtctagc
ttttctggctgcatgcggagactccagctgaatggccgctggctcacctcggcctccagc
agttttggggtcacaccttgctatgagggcccctctgaaccagggacatacttcactgag
gagggaggatacgtgcttctggatgactcctttgatcttggctcaagatttaagctggtg
atggaggtgcgtcctcgtgtggcgtcaggagtgctactgcatgtcttcactggagagaag
gaatatctcaccttgtacatctatcaaagccaggtggtggtcgtggtgagtaatggtatc
cgtgagttctccacatatgtgtctccaacagaagaaatctgtgatggaagctggcacaag
atcacagtgatcagagatggtcccacggtgcagctggacgtggactcagaggtcagtcac
gtcatggcgtctgtcagggaaccagcgcagatgtccgacgctccagtgtttcttggagga
gctccagcctccatgctgtctcccagtctcctcagccggagaggctacaccggctgcatg
aggagtgtgtctgtgaacgagtctccagtgagcttcagtgctgcggcgctggtcagcgga
gcggtcgatgtgggctcctgtcccgccgcttga
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integrated database retrieval system