KEGG   Pimephales promelas (fathead minnow): 120468288
Entry
120468288         CDS       T08155                                 
Symbol
tube1
Name
(RefSeq) tubulin epsilon chain isoform X1
  KO
K10391  tubulin epsilon
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    120468288 (tube1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprm03036]
    120468288 (tube1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pprm04812]
    120468288 (tube1)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120468288 (tube1)
Cytoskeleton proteins [BR:pprm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120468288 (tube1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_2 DUF3830
Other DBs
NCBI-GeneID: 120468288
NCBI-ProteinID: XP_039512940
LinkDB
Position
Unknown
AA seq 470 aa
MTQSIVVQVGQCGNQVGCRFWDLALREHAHVNQTGVYDEALSSFFRNVDQRRAGGSDATG
GRITALKARAVLVDMEEGVLGEILQGPLRSLFNSTQLISDVSGSGNNWAVGHHTYGLTYR
EQIVDQVRKAAEHCDCLQCFFLIHSMGGGTGSGLGTFVLKLLEEEFPEVCRIVTSVYPTA
EDDVITSPYNSVLAMKELTEHADCVLPVDNQSLVDIVGKIQHMSNTGKPSCTIKKDCTII
SGQGGVVKVEKPFDAMNNIVANLLLNITSSARFEGSLNMDLNEIPMNLVPFPRLHYLVPS
LTPLYTLADVNVPPRRLDQMFSDAFSKDHQLIRADPKHNLYLACALMLRGNVQMSDLRRN
IERLKPTLPFVPWNQEGWKTSLCSVPPVCHSHSLLALANNTCVKSTFLELRERFVKLYRR
KAHLHHYLAVDGMELAGFNEALSSISDLIEDYTHLEHPLMPNAPRLTIAT
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacacagtccatagtagtccaagttggtcagtgtgggaatcaggtgggctgccgcttc
tgggacctcgcgctcagagaacatgcacatgtcaatcaaacaggagtttatgatgaggcg
ctgagcagcttctttagaaatgttgaccaaaggagagcgggtggatcagacgctacaggg
ggcaggatcactgctctaaaggccagggccgtattagtggacatggaggagggagtccta
ggagaaattcttcaaggaccgttgcgttctctcttcaacagcacacaactcataagtgat
gtctctggttcaggcaacaactgggcagtcggccaccacacatacggtttgacctacaga
gagcagattgtggatcaggtccgtaaggctgcagaacactgtgactgtcttcagtgcttc
ttcctcattcattccatgggaggaggcactggttcggggttaggcacatttgtgttgaag
cttctagaagaggagttccctgaggtgtgccgcatagtgacctcggtttacccgacggcc
gaggatgatgtcatcacctctccctataacagcgtcctagccatgaaagagcttacagaa
catgcagactgcgtcttgccggtcgataaccagtctctggtggacattgttggtaagata
cagcacatgtccaacactggcaaaccaagctgtactatcaagaaggactgtaccatcatc
tctggacaaggaggggtggtgaaggtcgaaaaaccttttgatgccatgaacaacattgtg
gccaatctacttcttaatatcaccagttcagcacgttttgagggctctctcaacatggat
ctgaatgagatccccatgaacctggtaccgttcccgcgtttacattacctcgtgcccagt
ctaactcctctctacacacttgcagatgtcaacgtaccaccacgcaggctggatcaaatg
ttctcagatgcattcagcaaggatcatcagctgatcagagccgaccccaaacacaacctg
tatctggcctgtgctcttatgctgcgtggaaacgttcagatgtcagatctgcgccggaat
attgagcggctaaagcccaccctgccatttgtcccatggaatcaggagggatggaagact
agcctgtgttcagtccctcctgtgtgtcactcacattccctgttggccttggccaacaac
acatgtgtgaaatctacctttcttgaactaagggaacgttttgtgaaactctaccgtagg
aaggctcacttgcatcattatctagcagtggatggcatggagttggctggatttaatgag
gcactatcatctatctcagatcttattgaagactacacacacctggaacaccctctcatg
cccaacgcacccagactcaccatcgccacctga

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