Pimephales promelas (fathead minnow): 120468552
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Entry
120468552 CDS
T08155
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120468552 (irx3a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120468552 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120468552
NCBI-ProteinID:
XP_039513000
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDED
GNVYNSDHEGEDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHHHNHHHHHHLHNHNSLEHANGEPVKLNQ
AIINSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASATQTIITPHRLLSC
PVGKIQSWTNRGFTAHQLALLNTNHYLGLSNQASANGLALYSRQAEDRSQNSESTVTERS
SALEAEKKLLKTAFYPVQRRPQNQLEAAMVLSALSSS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgacccatatacccgcaggacaggcag
gggataggcagtgcccgagccgggacagacctgagcccgtccggagcgctctctaatgtt
ctctccactatgtacggatcacctttcgctgccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccaactgggcgcacagtacgaattgaaggacagt
ccgggcgtccagcatcctggatttgctcaccatcatccggctttttacccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagggagagcaccagcacactc
aaggcctggttaagcgagcaccggaaaaacccgtaccccaccaaaggagagaagatcatg
ctggccatcatcacaaaaatgaccctcactcaagtgtccacctggttcgccaacgccagg
aggaggctaaagaaagagaacaagatgacctgggccccacggagtcgcacggacgaagac
ggaaatgtttacaacagcgatcacgagggagaggacggcgacaaacgcgaggacgaggaa
gagatcgatttggagaatattgacacggagaatattgagaataaggacgatttagacgag
caagacgaactgcattctgatttgaaactggacggcaggagcgactccgaaatttcggac
ggctatgaggatttacaaggaccagagcaaaggttgttcaaagcaatggtgaaagacggt
aaagagattcacggcgaccgcgcagagcattttcaccatcacaatcatcatcatcatcat
catcttcacaaccacaacagtttagaacacgccaacggtgagccggtcaaactcaaccag
gccatcatcaactctccgccctcggaaaacaacccacctcctgctccgaaacctaagatc
tggtctttggcagagactgccacaactccagacaatccacgaaaatctcctctgatgaac
gggacttccgctgcgtccgccactcagaccatcataactcctcacagactcctttcgtgt
cccgtagggaaaattcagagctggacaaatcggggtttcaccgcacaccagctcgctttg
ctgaacacaaaccactacttaggactcagtaatcaggcttcagcgaatggccttgcgttg
tacagcagacaagcagaggacaggagtcaaaactccgagtccacagtcacagaaagatct
agtgccttggaagcagagaaaaagttgctaaaaacagccttctatcctgttcaaagacgg
ccccagaaccaactcgaagctgccatggtattatccgccctctcgtcctcgtag
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