Pimephales promelas (fathead minnow): 120468584
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Entry
120468584 CDS
T08155
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120468584 (ptbp2b)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120468584 (ptbp2b)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
120468584
NCBI-ProteinID:
XP_039513025
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MDGIASDVAVGVKRSSDELLSGSLYSPNSSVTANGGDSKKLRVEDSMDSPPSRVIHIRKL
PNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPV
FIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGESVLTPAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAAALSKDSTSLLGTPSG
MVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSTPGGVLLVSNLNDEMVTPQS
LFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQT
VQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRLL
FSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagcgatgttgcagtaggtgtgaagagaagctcagatgaattgctg
tctggcagtctgtacagtccaaactcttcagtcactgctaatggaggtgacagtaagaaa
ctgagggtggaggacagcatggatagcccaccgtctagagtcattcatattcggaaactc
cccaatgaggtttccgagacggaggtcatcgccctgggattgccctttggaaaggtcact
aatatcctgatgcttaaaggcaaaaatcaggcatttttggagctgggaacagaggaagca
gctgttaccatggtgaactactacacagctgttacacctcaagtgcgtaatgtcccagtg
ttcattcagtattccaaccacaaagagctcaagactgacagtgcgctcaaccagcgagct
caggctgtgctgcaggcggtgtcggcagtccaggaaggcggctctccaagctcagacacg
gccggtgagagtgtgttaacacctgcccccagcccagtactacgaataatcatcgacaac
atgttctacccagtcactctggacgtcctccaacagatcttctccaagtttggaaccgtc
atgaagattatcacattcaccaaaaacaatcagttccaagctcttctgcagttcagtgac
cccgtaaatgcccagcaggccaaactgtctttggatggccagaacatatacaactcctgc
tgcactttgcgcattgacttctccaagctggtcaacctgaacgtaaaatacaacaacgac
aaaagccgggattatacccgtcccgagctgcccgcgggagatggccaaccacctgtggac
ccgtctgtggccgccgctctcagcaaagattccacctcactgctcggtactccctctgga
atggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagccct
ctgagtgcagcggcggcggcggcggcagctgcagggagggtggcgctgtccggacattcg
acacctggcggagtgctcctggtcagcaacctcaacgatgagatggttacgccccaaagt
ctgtttaccctcttcggtgtctacggtgatgtgcagcgcgtgaagatcctgtacaataag
aaggacagtgctctaatccagatgtctgatggaaaccaagcccagttagccatgagccat
ctgaatgggcagaagatgtatggcaagatcattcgtgtgaccctctccaagcaccagaca
gtacagctgcctagggagggcttagatgatcagggcctgaccaaggacttcaccagctct
ccactgcatcgcttcaagaagcctgggtctaagaatttccagaacatcttccccccttca
gctacacttcatctctctaacatacctgataatgtgacagaggaggatttacgactgctc
ttctcaaactctggcggtacagtgaaggcgttcaagtttttccaagatcgcaaaatggct
ctgctgcagatgtccacggtggaagaggcgattcaggctctcatcgaccttcacaactac
gacatgggccgaggtcaccgcctgagggtgtccttctcaaagtccaccatctga
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