Pimephales promelas (fathead minnow): 120468594
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Entry
120468594 CDS
T08155
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120468594
04121 Ubiquitin system [BR:
pprm04121
]
120468594
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120468594
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120468594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
zf-C2H2_7th_ZNF462
At4g08330
DBD_Tnp_Hermes
hAT-like_RNase-H
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
120468594
NCBI-ProteinID:
XP_039513045
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MANADKPELEEPPISLMSPVWEHFGFPVKYVDGQRLVDKTKAVCRHCSVTIGYVAGNTSN
LLTHLKRHHPNVNITSTRKKTSIVQTQLPLAFKQTFAGNSDRAKAITNAIGVFIATDLRP
YSVVENIGFKHMMKVTEPSPTAAHILESKQEMLNITKHSLIHDVTTRWNSSYDMLERYLE
QQAAVYSALTEKALKKNKEISTLSDQDVKMAEEVLEVLKPLKTITTLMSTESTPSVSMIL
PLKTTVLNSMTPNEEDSSTVREIKAVITEKLKNRYSACHDFLHKCTALDPRFKALPHVDD
ACRDRIYNDLITEIVTMEEQSAEATAVSSSPVTGHSEASSPPVKKSAMAELFGELFKTQV
GNKPTLQLVKEEVTL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcagacaagccagagcttgaagaaccacccatatcattaatgtctcctgtt
tgggaacacttcggtttcccagtgaaatacgtcgacggacaaaggctagtcgataaaacg
aaagcagtgtgccgacattgctcagtaacgatcgggtatgtagctggaaacacatcaaac
ttgttaacgcacttgaaaaggcatcacccgaatgtgaacatcacttctacgaggaaaaaa
acgagcatagttcaaacgcagctcccgttggcatttaaacagacctttgctggtaattcc
gatcgggccaaagcaataacaaatgcaattggtgttttcatagcaactgatctacgacca
tactcggttgtggagaacattggttttaagcacatgatgaaggtgactgagcccagccca
acagcagcacatatattggagagcaaacaggaaatgcttaatattacaaaacacagcctt
attcatgatgtcaccacccgctggaactccagttatgatatgctagagaggtaccttgaa
cagcaagcagcggtgtattctgccctgacagaaaaggccctcaagaagaacaaagaaata
agcacgttgtctgaccaggatgtgaaaatggcagaggaggtacttgaggttcttaaacca
ctaaaaaccatcacaacactgatgagcactgaatccacaccttcagtatcaatgatcctc
cccctaaaaaccacagtactcaactctatgacacccaatgaggaagacagttcaactgta
agagaaatcaaggctgtcatcacagaaaagctgaagaacagatactctgcttgtcatgac
ttcctccacaaatgcacagctcttgatccaaggttcaaggcccttcctcatgtggatgat
gcctgtcgtgacagaatctacaacgacctcatcacagaaattgtaaccatggaagaacag
agtgcggaggccacagcagttagttcatctccagtgacaggacactcagaggcatcatct
cctcctgtcaagaagtctgccatggctgaactgttcggtgaactctttaagactcaggtg
ggaaacaagcctactttgcagctagtgaaggaagaggttaccttataa
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integrated database retrieval system
