Pimephales promelas (fathead minnow): 120468599
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Entry
120468599 CDS
T08155
Symbol
abca4b
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120468599 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120468599 (abca4b)
Transporters [BR:
pprm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120468599 (abca4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_22
KIF1B
AAA_15
Motif
Other DBs
NCBI-GeneID:
120468599
NCBI-ProteinID:
XP_039513050
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MNTGSKTRLLLWKNWTLRKRQKIRFLVEILWPVVLFIGLVWLRRANPLYRQHECHFPSKA
MPSTGILPWIQGIFCNANNPCFRHQTRGESLGVVSNYHNSILARFYMDSQELLFNDTEFH
QLGRLWHEVTIMSNFMETLRTNPELVAGKGLKVEYILKDDESLTSFLLRDVGLSIAVVND
LTNALLRVEQFAYGVPDLTLKEIACSQALLERFLIFPSRRGLYGVHSAMCALSQQRLQKI
EDVLYANLDFFKLFRLLPVILDNHTTGIDLHFWGRVLSAVSDKLQELAERPSSQDLMRVM
YSVFQPGGPSSFSQLISTVSDLFCGYPEGEGTRVFSFNWYEDNNYKAFLGINNSRGHESY
TYDETATPFCNALMQNLESNPITKIVWNSVKPLVMGKILYTPDSPAVRKIIKSANTTFEE
LERLQKLGKVWEEVGPQLWDFFQNSVQMNMIRETLRNPTVMDFLDRRLKETEFSTKDILN
FLHNGPKEDRYMNMTNFDWRDVFSLADQVIRMFNQYSECISLDKFVGHMDENLMTHQALH
LLGENKFWAGLVFMDMYPWTTDLPRHVKFKIRMDIDAVERTNKIKDRYWDPGPRADPLED
HRYIWGGFAYLQDMIEHGILKLHTGHDWPLGVYVQQMPYPCYVDDMFMLTLNRCFPIFMV
LAWIYSVSMVVKSIVLEKEMRLKETLKAMGVANRVIWCTWFIDSFLVMSASTALLTAIIM
GGKVLNYSDPIILFLFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHIFCF
AWQDRITKNMKLAVSLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDEYSFFTSI
RMMLLDAVLYAVLAWYLDNVFPGQYGIGQPFYFPLQPSFWLNPTPLPTQNPDPGPEMPLV
NNLEKQEDVEYGGLSPDQRECNGSRSSKNCKHKEKRERMEKERERDEHLKIHEEIQQEEI
QPVHDGNPFFEPEPEGLLIGVSVQDLVKVYSRNSRPAVDCLNMNFYEGQITSFLGHNGAG
KTTTLSILTGLFPPTSGTAYIYGKDIRTEMDTIRQSLGMCPQYNILFNHLTVEEHILFYS
LMKGRERKEAEQEVEDMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSRVVILDEP
TSGVDPYARRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLK
NCFGVGFYLTLVRRMKNQRKKENECDCTSECSCSCSSCTRYKEESQAVQPERILDGNVES
ITNLIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLADMGLSSFGISDT
SLEEIFLKVTADGEAANSSVTPEQWMLQQRKTSFLRDRETTSNVEDANGVGSPQESDNSG
GRASKQVKGFSLVLKQFHALIVKRFHHATRSHKDFLAQIVLPSSFVLIALVFTMIVPPFG
EYPSLTLTPWMYGPQLTFISNEQPSHPKMKHFMQTLLKDPGMGTRCMRPQPLEDLFTCLN
ASSDWEVPPVSPEVTNILLSPEWNQRNPSPSCECSTDTKLTMLPFCAAGAGGLPPPQRKE
PTGDILLDMTNKNISDYLVKTYPKLIKTSLKSKYWVNEQRYGGLSVGGQLPILDVDPEEI
LNILSQLGRIMNITGGPYSKSAMNELGTFLHYMESEYNVKVWYNNKGWHAMVSFMNIANN
AILRAYLPPHANPSEYGITAINHPLNLTKEQLSEVTVLATSVDAVVAICVIFAMSFIPAS
FILYLIQERVTKAKHLQFVSGVSPVVYWVANFFWDMMNYSLSTVMVVAIFMGFDKKCYTS
PTNLPALVALLFLYGWSVTPMMYPMSYIFNVPSTAYVSLSCINLFIGINSSAITFILELF
ENNRSLLMFNEVLKKVLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEYAMDPFRWNFVG
KNLVCMAVEGFVYFIFNLVIQYNFFLDHWATDYVKSPVKDEDDDVAQERERIYKGGNKND
ILLVRDLSKTYRRRKRPATDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVTSGEA
SVAGYR
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgggcagcaagacccgtctgctgctgtggaagaactggacactccgcaagaga
caaaagattcgcttcctggttgagattctgtggcctgtggttttattcattggacttgtc
tggctacgaagagcaaatcccttgtatcgccaacatgaatgtcattttcccagcaaggct
atgccctcaacgggaatcctgccttggatccaagggattttctgcaatgctaacaaccca
tgttttcgccatcaaacccgaggagagtcgcttggggttgtttccaactaccacaactcc
attctggcacggttttacatggattctcaggagctgctgttcaacgacaccgagttccat
cagcttggacgtttgtggcatgaagtcactatcatgagcaacttcatggagacgctgcgc
accaatcctgagctggtggcaggtaaaggactgaaagtggagtacattctgaaggacgac
gagagtctaacgtcattcctacttcgggacgttgggctttcaatagctgttgtgaatgat
cttacaaatgcactcttgcgggtggagcaattcgcatatggtgtcccggatcttactctg
aaggagatcgcctgcagtcaggctcttctggagcgattcctcatcttccccagccgcaga
ggattgtacggggtccatagcgccatgtgtgccctttcccagcagagactgcagaagatc
gaggatgtactttatgccaacttagacttcttcaagctcttccgactgttgcccgtgatc
ctagataatcacacgactgggatagacctgcatttctggggtcgagtgctttcagcagtg
tctgacaagcttcaggagcttgcagagaggcccagctctcaagacttgatgcgggttatg
tactcggtcttccagcctgggggtccctcttccttcagtcagctgatatccactgtgtca
gatctgttctgtggataccccgagggggagggcacccgggtcttctcctttaactggtat
gaggacaacaactacaaggctttcctaggcatcaacaactcaagaggacatgagagctac
acttatgacgagacagcaactccattctgtaatgcattgatgcagaacctggagtcgaac
cctattactaaaatcgtgtggaattcagtgaagcctctggtgatggggaagatcctgtac
accccagactccccggctgtcagaaagataataaagagtgccaacactacttttgaggag
ctagagaggttgcagaaactgggtaaggtctgggaagaggtgggaccacagctctgggac
ttctttcagaacagcgtccaaatgaacatgatacgggaaacacttagaaaccccacagtg
atggactttttggacaggcgtctaaaagaaaccgagttctctaccaaagacatccttaac
ttcctgcacaatggtccaaaagaggatcgatatatgaacatgacaaactttgactggaga
gatgtcttcagtctggctgatcaggttattcggatgttcaaccagtacagtgagtgtata
agtctggacaagtttgtgggtcacatggatgagaatctgatgacccatcaggccctgcac
ctgctgggggagaataagttctgggcgggtctggttttcatggacatgtacccctggacc
acagacctgccccgccatgtcaagttcaagatccgaatggatattgatgcagtggaacgt
accaacaaaatcaaagacaggtactgggaccctggtcccagggcagaccctctggaggac
catcgctacatttggggaggttttgcctacctgcaggacatgattgaacatggtatcctc
aagttacacacaggtcatgactggcctctaggtgtttacgtgcagcagatgccctacccc
tgctacgtggatgacatgttcatgctgaccctaaatcgctgtttccccatcttcatggtg
ctggcctggatctactcggtgtccatggtggtgaagagcatcgtgctggagaaggagatg
aggctgaaggagacactaaaagctatgggcgtcgctaatagagtcatttggtgcacatgg
tttatcgacagtttcctcgtgatgtccgccagcaccgctttgctgactgccattatcatg
ggtggaaaagtgctcaattacagcgatcccatcatcctgttcctgttcctcctcacgttc
actgtggccaccatcatgcagtgctttctgatgagcgtgttcttcaataaggccaacctg
gctgcggcttgcagcggtatcatctacttcaccctgtacctccctcatatcttctgtttt
gcctggcaggaccgcatcaccaagaacatgaagttagctgtgagcttgctgtctccagtg
gcctttggttttgggacagaatatctatcccgttatgaggagcaaggcctgggtctgcag
tgggacaatatcggtaccagtcctctagagggtgatgagtactccttcttcacttctatt
cggatgatgctattggatgcagttctttatgctgttttggcttggtatctcgacaacgta
tttcctggccagtatggcatcggccagccattttatttccctctgcagccctcgttctgg
ctgaacccgacacctttacccacacagaatccagatccgggccctgagatgcctctggta
aataatttggagaagcaggaggatgttgagtatggtggcctttcaccggatcaaagggaa
tgcaatggttcccgcagcagcaagaactgcaagcacaaggagaaacgagagaggatggag
aaagagagagagcgggatgagcatctaaaaatacatgaagagattcaacaagaggagatc
cagcctgtgcacgatggaaatccattctttgagccagagccggagggtttgttaatagga
gtgtcagtgcaggacttggtgaaggtgtattctagaaactcaagacctgcagtggactgc
cttaacatgaacttctatgagggccagatcacttctttcctgggtcacaatggggcagga
aagaccaccactttgtccatattgaccgggttgtttccgcccacctctggaacggcttac
atatatgggaaggacattcgtacagaaatggacaccatacggcaatcgttgggcatgtgt
ccacagtacaacatcctcttcaaccatctgacagtagaggagcatattctcttctactct
ctgatgaagggacgtgagcgcaaggaggccgagcaggaggtcgaggacatgctggaggac
ctgggattgcctcataaacgagacgaggaagcacagaacctctctgggggtatgcagagg
aagctgtcggtggcgatggctttcgtaggcggttctagggtggtgatattggatgagcca
acgtcaggagtggatccatacgccagacgctccatttgggacctgctactcaagtaccgc
acaggccgcacagtaatactgtccactcatcacatggacgaggcagacctgttaagtgac
agagtggccattatctctaaagggaaattacactgcagtggttctcctctttttctgaag
aactgctttggagtgggtttctacctcacgcttgtgcgtcgcatgaaaaaccagcgcaag
aaagagaatgagtgtgactgtacttctgagtgttcctgctcctgctcctcctgcactaga
tataaagaggagagtcaagcagtacagcctgagagaatactagacgggaatgttgagagc
attactaatctgattcatcaccatgtacctgaggcaaagctgattgaaatgatcgggcaa
gagatgacctatctgctccctaataagggttttaaatatcgtgcgtacgccagccttttc
cgagaactggaggaaactttggctgacatgggcctcagtagctttggtatatctgacaca
tcccttgaagagatctttctgaaagttacagcagatggagaagcagccaacagctctgtc
acacccgagcaatggatgctacaacagaggaaaactagtttcttgagagacagagagact
acgagcaatgttgaagatgcaaatggtgtggggagcccacaagagtctgacaacagtggc
ggtagagcctccaagcaggttaaaggctttagcctggtcctcaagcagttccacgctctt
attgtcaagagatttcatcatgccacacgcagccacaaagatttccttgcacagattgtt
ttgccatccagttttgtccttatcgctttggtcttcactatgattgtcccaccatttgga
gagtatcccagtctgaccctcactccatggatgtacggaccacagttgacctttatcagt
aatgagcagccatcgcatccaaaaatgaagcacttcatgcagacgttgctgaaggaccct
ggcatgggaacacgctgtatgaggcctcagcccttggaggacctctttacctgtttaaac
gcatcatctgattgggaagttcctccagtgtctcctgaggtcacgaacatcttattgagt
cccgagtggaatcaaagaaacccttccccttcctgtgagtgcagcactgatacaaagctc
accatgctgccgttctgtgcggctggagctggaggactgccaccaccacagagaaaagag
ccaacaggggacattttgcttgacatgacaaacaaaaacatatcggactacttagtgaag
acttaccccaagctcatcaagaccagcttgaagagcaaatattgggtgaacgaacaaagg
tatggtggactctctgttggtggacaactaccgatcctcgatgtggatcctgaggagata
ctgaatattctttcccagcttggacgtataatgaatattacagggggcccctattcaaag
tcagccatgaacgaattaggaactttcttgcactacatggagagtgagtacaatgttaag
gtgtggtataataacaaaggctggcacgccatggtctccttcatgaacatagcaaacaac
gccattctccgtgcttacctgccgccacacgccaacccttcagaatacggcattactgcc
atcaaccacccgctcaacctcaccaaagaacagctctcagaagtcactgttctcgccaca
tcagtggatgcagtcgtggccatctgcgtcatctttgccatgtccttcatcccggccagc
ttcatcctctacctcattcaggaacgtgtcaccaaggccaaacatctgcagtttgttagt
ggagtcagccctgtggtttactgggtcgccaactttttctgggacatgatgaactactcc
ctcagcacagtgatggttgtggccattttcatgggttttgataagaagtgctacacatca
cccacaaatctgccagcgctggtcgctctgctttttctctatgggtggtcagtgacgccc
atgatgtaccccatgtcttacatattcaatgttcccagcacggcatacgtgtccctctcc
tgcatcaaccttttcattggtatcaacagtagcgccatcaccttcatcctagagctcttt
gaaaacaacaggtctctactaatgtttaatgaggtgttgaagaaggtgttactggtcttc
cctcacttctgtctcggccgaggtctcatagatatggccatgaaccaggccgtgactgat
gtctatgccagatttggggaggagtatgccatggatccgttcagatggaactttgtgggg
aagaatctcgtctgcatggctgtggagggtttcgtgtatttcatctttaacctggtcatc
cagtacaattttttccttgatcactgggcgacagactatgtgaagagtcctgttaaagat
gaagatgatgatgttgctcaggagagagagcgcatttacaaaggagggaacaagaatgac
atccttctagttcgagacttgtcaaaaacatacaggcgcagaaaaagaccagcgacggac
agaatctgtgttggagttccagcgggggagtgctttgggcttcttggtgtaaacggtgca
ggtaaaaccacaacctttaaaatgctaaccggagacacagatgtgacatcaggcgaggcg
tcagtagctggatacaggtaa
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integrated database retrieval system
