Pimephales promelas (fathead minnow): 120468601
Help
Entry
120468601 CDS
T08155
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120468601 (chd9)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120468601 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120468601
NCBI-ProteinID:
XP_039513056
LinkDB
All DBs
Position
Unknown
AA seq
2953 aa
AA seq
DB search
MTDPIMDFFDDPNIFGGGLDSLVQDDPGFTPGSVSLDDELHLGPSLDNLQVDAGSRSSTI
QHGIPYNQPVGHFDTMKAHTSMEQSFPGPEVGSNDGRAFLPQQQPFQGHTMNQVSQTNGL
FLHNSPMWGNHDQKGSNYHQHHHQHHHQQLHQQLQHKQFQQQQQFQQHQAQHQQYSHQHI
QQRQHSLNQHPISNQLQLPHQQIAHQGLQEITKTYQEHLNFYYEGNVPQNHSQQRHHNSL
SVEGSPFCPTVAPSGLSQSKQYLEASMRPVSSQHSGFQVAQGVQGFTTGPRLEDNDLAFP
VQSSPATHSFPTDSVSHGSSYPTARYVPPVVSETQSYSSAPVSISTSSMVISSSASNLLD
TGCPFLSNSGMQHQHQQVRIPGSPAQQCPLRSSKTDQNPFSSSEVFSDGLNSFSANRPFS
TAEQRTCGVPGSLVANQSVSSINGLQALEEVLLGEQPDQRLDDLDEASDLMGDELLPQLE
ALDQEENSNHSWINVGLGNGREEEAKEGFSDVPSYNVQPPKNTNGPSSQPRVLSPPVKNS
SSSSSSSSSYVSVSEKRVPKRHQQQQQQPQQQMDSSLSDDKQQKANRIISEAIAKARERG
EKNIPRVMSPECFPSSSSQHRSHRAGSSKSRGKNKSSKKARIVASSKPKQKAKIGKIVIK
FGKKKRKKTDSSDELSDDDRPTRRSSKDDDSKRRSNRKIKRKKYEDDCEARLSDEEMKVI
VKAKKGNPNAQKQPAVQLFVENPTEEDAAVVDKIMASRVVKKEVSPGVMVEIEEYYVKYK
NYSYLHCEWATEQQLEKDKRIQQKIKRFKIKQAQKAHFFADIEEEPFNPDYVEVDRVLEV
SYCEDKDTGEPVVYYLVKWCSLPYEDSTWELSEDVDQSKIEEFKKLQAAKPHTNRVERPP
ASHWKKREQSREYCNGNCLRDYQLEGVNWLLFNWHNRRNCILADEMGLGKTIQSITFLEE
IYRTGIKTPFLIIAPLSTITNWEREFRTWTNLNVIVYHGSVVSRQMLQQYEMYFRDAQGR
VIRGAYRFQAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHK
VLLTGTPLQNTVEELFSLLHFLEPTRFPSENLFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELR
KCCNHPYLIKGAEEKILEDFKVYSPTAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRDNSLGGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEED
IDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMETVN
GRNSLVIDTPRVRKQTRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRV
EKNLLVYGWGRWKDILTHGRFKRQLSERDVEYICRALLAYCLVHYRGDDKIKSFMWDLIA
PTEDGRTKELQNHLGLSTPVPRGRKGKKMKIQSSSFDIQKAEWIRKHNPEHMLSDDGYKK
HLKHHCNKVLLRVRMLYYLKQEVIGAQCQKVLDGVDASEIEIWVPEPDHSEMPALWWDML
SDKCLLLGVYKHGYEKYNTIRADPALCFLERVGRPDEKAIAAEQRGNDFIDGDVDDPEYK
PAPALLKDDMEDDASSPGDLVITDAGGEGGSVLDGGGGSLGAGSGVYWPSPSTLTARLRR
LITASQRFTKSRQILQIHQTQQATTPALYALPPTISDTLNPKIAAKIERQQRWTRREEAD
FYRVVSTFGVVFDPDLGRFDWTKFRAMARLHKKTDESLHKYLCAFIAMCRRVCRLPAIEG
DMVDSSLAIQPITEERASRTLYRVELLRKIREQVLRHPQLYEHLALCQPGPDLPVWWEAG
SHDRDLLLGAAKHGVSRTDYHILRDPELCFIAAQRNYSQNKGTVSQAQNQTHSLGQCHIP
APLQHIQPKEASASPLLNQTELKEELMSEGEEERIEREPKMEIPSIRPPTPSGVDEKDNV
NKAGESESRMVAARTKPLTPNSVTRKQKKLSKRSRREARRGSGSDSEGSSSSSSSSSSSR
SSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEDSDSEEVPKNASAVPGVKGFDE
DSIASLNTTQDDMQDSHVTNGISHPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKG
KWPGVRRAYEGNAVTSFYTTKLLDNATTLTEDPSASPQGSKVKKHVADREKEFSVKINNQ
EGSLKLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTLNSYPQVP
PGQMRLNGVIDGQPVVKRRRGRRKNVEGMDLLFMNRNRPSVMPEQVPAGWSGGIAGTSAP
PGLSTPQGPGTHDTESRVPVISLKDGTRLAGEDAPRRKDLDQWLKEHPGFVADVGAFIPS
ATKLQFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSRF
LQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKAATMSS
ASANAALGLNPLLSNLTGLDLPSLQALQHNLQSLQSLQLTTGLMGLPPDPTNMAAMFPMM
LSGMTGLPNLLGMSGLLGKPSQEAAGGASTVDEDGKKRNGGDSATHKALAQTLIPDSKAE
RTEGQSSRATTSMATNSNQTSASVSGHSLALNPLLLSSMLYPGMLLTPGLNLPVANQPQA
ANTQPTPLLQPAASEATVQRPGRSEDRDSDEGEEPDEKKDTSGPEGSAKAESSSSESDSS
SSSSEDSDSSEED
NT seq
8862 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccatcatggacttctttgatgaccctaacatatttgggggagggcttgac
agcctagtccaggatgatccagggtttacacctgggtcagtgtccttggatgatgaactt
cacctcggtccgagtttggataatcttcaggtggatgcagggtccagatcttctaccatc
caacacgggataccctacaatcaacctgtggggcattttgacactatgaaggcacatacc
tcaatggaacagtcctttcctggtccagaagtaggtagcaatgatggaagagcatttttg
ccacagcagcaaccatttcaagggcatactatgaaccaagtgtcccagaccaatggactg
tttcttcacaacagccccatgtggggaaaccatgatcaaaaagggagtaactaccatcag
catcatcatcaacaccaccaccaacaacttcatcaacaacttcaacataaacaatttcaa
cagcaacaacagtttcagcagcatcaagctcaacatcagcagtacagtcaccaacatatt
cagcagagacagcacagtctcaatcaacacccaatctcaaaccagctgcagcttccacac
caacaaatagcccatcagggcttgcaagaaattaccaagacctatcaggaacatctcaat
ttttactatgagggcaatgtcccccaaaatcattcccagcagcgccaccataactcgctc
agtgtagagggtagtcctttttgtcctacagttgccccgagtggtctttcacagtccaaa
caatatcttgaggcctcaatgaggcctgtgtcttctcaacacagtggctttcaggtggct
caaggggtccaaggttttactacaggtccaaggttggaagacaatgacctagccttccct
gtccagtcttcccctgcaacccattctttcccaactgactcggttagccatggttcatcg
tatcccactgctcgttacgttccccctgtagtaagtgaaacccagtcttactcctctgcc
ccggtatctatttcaacctcttctatggtcatctcatcatcagcttcaaacctgttggat
actggttgtcctttcttgtctaattccggaatgcaacatcagcaccaacaagtcagaata
ccgggcagtccagcacaacagtgccccttacgtagctccaaaacagaccagaatcccttc
agctcctctgaggtattctcagatggcctgaactcattctctgcaaaccgtccattctct
acagcagagcaaaggacctgtggtgtgcctggatctttagttgcaaaccagagtgtaagc
agcattaatgggcttcaggctctagaggaggtcttgcttggagagcaacctgatcaaaga
cttgacgatctggatgaggcttctgacctaatgggtgatgagctgttaccccagctggag
gcactagaccaagaagagaactccaatcactcttggataaatgtaggactagggaatggt
cgagaagaggaagcaaaggaaggcttttcggatgtgccttcatacaatgtacagcctcct
aagaacactaatggtcccagcagccagcctcgggtactcagccctccagtgaaaaacagt
tcctcttcttcctcttcgtcatcctcgtacgtatccgtgtctgagaagagggtgccgaag
cgacatcagcaacagcagcagcagccgcagcagcagatggattcatctctttcggacgat
aaacaacagaaggccaatcgaataatctcggaggccatcgccaaagcacgagagagggga
gagaaaaatattccacgcgtcatgagtcccgaatgctttccgtcttcatcgtctcagcac
cgcagtcacagggcaggttcttccaagtccagaggcaagaataagagttccaagaaggcc
cggattgtggcgtcatccaagcccaagcaaaaggctaaaattgggaaaatcgttataaag
ttcgggaagaagaagcgaaagaagacagattcctcagatgagctgtctgatgatgacaga
ccaactcgacgatcctctaaagatgacgattcgaagcgccgttcgaaccggaagattaag
aggaagaagtatgaagatgattgtgaggctcgactgtctgatgaagaaatgaaggtcatc
gtcaaagccaagaaaggcaatcccaacgctcaaaaacagcctgcagtgcaactctttgtg
gagaacccaactgaggaagatgctgctgtggttgataaaatcatggcatctcgtgtagtg
aaaaaagaggtttctcctggagtgatggtagaaattgaagagtattatgtcaaatacaaa
aactattcatatcttcactgtgagtgggcgacggagcagcagttagagaaagacaagagg
atccagcagaaaatcaagcgcttcaagatcaaacaggcgcagaaagcacacttctttgct
gatattgaggaggagccattcaatcctgactatgtagaagtggaccgagttctcgaggtc
tcatactgtgaggacaaggacaccggagagccggtggtgtattacttggtgaaatggtgc
tcattgccatacgaggacagcacatgggagctgagtgaagatgtggaccagagtaagatt
gaagagttcaaaaagctgcaggcagcaaaaccacacaccaacagagtggagcgtcctcca
gcgagtcactggaagaagcgggagcaatcgcgagagtattgtaatggaaactgtctcagg
gattatcagctagagggggttaactggcttctcttcaactggcacaacaggcgtaactgt
attctggcggatgaaatgggtctgggaaagaccatccagtctatcacgtttctggaagag
atctatcgcacagggataaagacgccgttcctcatcatcgcccctctctctaccatcact
aactgggagagagagttcagaacctggacgaacctcaatgtcatagtgtaccatggcagt
gtggtcagcagacagatgctgcaacagtatgagatgtattttagagatgcgcagggtcgt
gtgataagaggtgcataccggtttcaggcggtcattacaacatttgagatgattttggga
ggctgtccagagcttaatgcaatagactggcgctgtgtcatcattgatgaagcccatcgg
ctcaaaaataagaactgcaagctactggagggcttcaaacttatgagtctggagcataag
gtgttgttgacgggcactcccctacaaaacacggtagaagaactctttagtctgctgcac
ttcctggagccgacccgcttcccttctgaaaacctcttcatgcaggaatttggagacctc
aagactgaggagcaggtccagaaactccaggccatcctgaaaccgatgatgctgcgtcgt
cttaaggaagacgtggagaagaagttagcccctaaagaggagaccatcatcgaagtggag
ctcaccaacatccagaagaaatactaccgcgctatacttgagaagaacttctcgttcctt
gctaaaggcgctggccaagccaacgtcccaaacctgctcaacaccatgatggaactgcgg
aaatgctgcaaccatccctacctcatcaaaggggctgaggagaagatcttggaggacttc
aaggtgtacagccccacagcagtagatttccacctgcaggctatgattcagtctgcaggt
aaactcgttctcattgataagctgctccccaagatgaaggccggtggacacaaagtactc
atcttctctcagatggtgcgctgcctggacatcctggaagactacctcatccagagaaga
tacctctatgagcggatagacggccgtgtacgtgggaacctccgtcaagcagcaattgac
cgcttcagtaaaccggactcagatcgattcgtcttcctgctgtgtacacgggcaggtggt
ctcggtattaacctcacagctgctgacacctgtatcatctttgactctgactggaaccca
cagaacgacctgcaggctcaggctcgctgccacaggattggtcagaataaagctgttaaa
gtatatcgactaatcacacgcaactcatatgagcgtgaaatgttcgatagagccagtctg
aagctgggattggataaagcggtgcttcaaagcatgagtggacgggacaacagtctagga
ggaggagggcagatgcaacagcagctctctaaaaaggaaattgaggaccttctacgacgt
ggtgcttacggtgccatcatggatgaggaagatgagggggcgaaattttgtgaagaggac
attgaccaaatcctgcaacgcagaaccaagaccataactattgaatctgagggccggggc
tccacatttgccaaggccagttttgtagcttcagggaatagaacagacatctctctggat
gaccccaacttctgggacaagtgggcaaagaaagcagagattgacatggagactgtcaat
ggcagaaacagtctggtgatcgacacccctcgggttaggaaacagacccgaccgttcagc
gccactaaggacgagctggccgagctctctgaaggggagagcagcggagacgacaaaccc
aaactccgccggccacacgaccgtctcaacagctatggtcgcactgagtgcttcagggtg
gagaaaaatctcttggtttatgggtggggccgctggaaggacatcctgactcatggtcgc
ttcaagcgacagcttagtgagcgtgacgtagagtatatctgcagggcgctcctggcgtac
tgcctcgttcattaccgtggagacgacaaaatcaaaagcttcatgtgggatctgatcgct
cccacagaggacggcaggaccaaggaacttcagaaccatttgggtttatcgactccagta
ccgcgagggagaaagggaaagaagatgaagattcagtccagctcatttgacatccagaag
gcagagtggatccgaaaacacaacccagaacacatgttgtctgatgatgggtacaagaaa
cacctgaaacaccactgcaacaaggtgctgttaagggtcagaatgctgtactatctgaaa
caagaggtgattggagcacagtgccaaaaagtgctggacggagtagatgccagtgagatc
gagatctgggttcctgagccggatcattcagagatgcctgctctgtggtgggacatgctc
tcggacaaatgtctgctattaggagtgtataagcacggttatgagaagtacaacactatt
cgtgcagatccagcactgtgtttcttagaaagggttggtcggccagacgagaaggccatc
gctgctgaacagagaggaaatgactttatagatggggatgtggacgaccctgagtataag
cccgctccagctttgctgaaggacgatatggaggacgatgcttcctccccgggagacctg
gttatcactgatgcaggcggagaaggagggtctgtattagatggtggaggtgggtctctg
ggtgctggctcaggggtgtactggccctcaccctccacgctgacagcccgactgcggcgt
ctgatcaccgcatctcagcgattcaccaagagcagacagatacttcaaatccaccagaca
cagcaggctacgaccccagccctctacgctctgcctcccaccatcagcgacacactcaat
cccaaaattgctgctaagattgaaagacaacaacggtggacacggagggaggaggccgat
ttctaccgtgtggtttcaacatttggggtagtttttgatccagatttgggccgttttgac
tggaccaagttcagagccatggctcgactgcacaagaaaactgatgagagtcttcacaag
tacctgtgtgcctttattgccatgtgcaggagggtctgccgcctaccagctatagaggga
gatatggtggactcctctcttgctattcaaccaatcacagaggagcgtgcgtcccgtacc
ctataccgcgtggagttgctgcggaagataagagaacaggtgttgcgtcacccgcagctt
tatgagcatctcgcactgtgccagcctggaccggatcttccagtgtggtgggaagcagga
tcacacgatcgagatcttctccttggtgcggccaagcacggagtcagtcgaacagactac
cacatcctccgtgacccggagctctgctttatagcggctcagagaaactacagccagaac
aagggaactgtctctcaagcccagaatcagacgcattcgctgggacagtgtcacatcccg
gcccccctccaacacattcagcctaaagaggcttctgcttcaccactcctaaaccaaact
gaactgaaggaggagctgatgtcagagggagaagaagagcgtatagagcgagagcccaag
atggagataccctccatcagaccacctacaccttcaggagtggacgagaaagataatgtc
aacaaagcgggagagagcgagagtcgaatggtcgcggccaggacaaaaccgctcacgcca
aactcggttactcgaaaacagaagaagctgagtaagcggagccgaagagaggccaggagg
gggtcgggatcagactcggagggctcctcgtccagctcttcgtcaagttcttcatcgaga
tcttcttcctcatcctcatcttcgtcacggtcaggatccagttcctcgtcctcgtcttcc
tcctgttcttcgggctcctcgtcttcatcatcatcctcatcctcatcttcagaagacagt
gacagcgaagaggtaccaaagaacgcgtcagcagtacctggtgttaaaggctttgacgaa
gacagcattgcctctctcaacactacacaagatgacatgcaggacagtcatgtgaccaat
ggtatctcccaccctccccaccctttccagggtggatatatgcttgctgcctcctactgg
ccaaaggaccgtgtcatgattaaccggttggacagtatatgtcaggcagtgttgaagggg
aaatggccaggggttcgtcgtgcttatgaaggcaacgcagtgacttctttctacaccacc
aaactcctggacaacgcaaccacgctcacagaagacccctcagcctcccctcagggttca
aaggtgaagaagcatgttgcagacagagaaaaggagttctcagtcaaaatcaataaccag
gagggcagccttaaactgaccttccagaagcaaggcctgcctctgaagcgccccctggag
ggtgaggagggacctctcgcccaacagcagtacttagcccggctacaagagttgcagaac
gcatctgataccagcctagcggactacaccaaaacactgaacagctatccacaagtaccg
ccagggcaaatgcgactgaatggagtgattgatgggcagcctgttgtgaagaggaggaga
ggacggcggaagaatgtggaggggatggacctgctgttcatgaacagaaacaggccttct
gtgatgccagagcaggttcctgctggttggagtggtggcatcgcaggtacatctgctccc
cctgggctgagcacacctcaggggcccggtacccacgatacggagagccgcgttcccgtt
atcagcctcaaagatgggacgcgactagctggagaggatgctccaagacggaaagatctt
gaccagtggctgaaggagcacccgggcttcgtggcagatgtgggagcttttatccctagt
gcaaccaagctgcagtttcaagatggcagaccaaaacagaagagacatcgctgtagaaac
cccaacaaaattgacatcaacagcctgacaggagaagagagagtacagattatcaacagg
cgaaatgctcgcaagattggtggtgcgtttgctccacctctgaaagatttaagccggttc
cttcaagagaatccagagtatggcgtcccaccagagtgggctgatgttgttaaacagtct
ggttacctccctgaaagtatgttcgaccgcatcttgactggccccatcgttcccgaagag
gtgagccggcgaggtcgacgccccaaaaacgctctggctaaagcagccaccatgtccagt
gccagtgccaacgccgccctggggctcaacccactcttatccaatctcactgggctggat
ctgcctagtcttcaagctcttcagcacaaccttcagagcctccagtctctccaactcacc
actggcctaatgggactgcctcccgatcccaccaacatggccgccatgtttccgatgatg
ctgtccggaatgaccggcctgccgaacctcctcgggatgagcggtctcctcggaaagccc
tcgcaggaagcggcgggtggagcttcgacagtcgacgaggacggaaaaaagaggaacggc
ggagattccgccacgcacaaagcgttggctcagactttgattccggatagcaaagcggaa
aggacagagggtcaaagctccagagccaccacctcgatggcgaccaactcgaatcaaaca
agtgcttctgtttcaggccactcactggccctcaacccccttctcctctctagtatgctc
tacccagggatgcttcttactccaggccttaacctgcctgtggccaaccagccgcaagct
gcaaacactcagccaaccccgctgctgcaaccagctgcctctgaagccacggtccagcgg
cccggccgctcagaggacagagacagcgatgagggggaggagcccgacgaaaagaaagat
accagtggtccagaaggctcagcgaaggcggagtcgtcctcctccgagtccgacagctcc
tcctcgtcatccgaggattccgattccagcgaagaagactga
DBGET
integrated database retrieval system
