Pimephales promelas (fathead minnow): 120468643
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Entry
120468643 CDS
T08155
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
pprm03015
mRNA surveillance pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120468643 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
120468643 (ncbp2)
03015 mRNA surveillance pathway
120468643 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120468643 (ncbp2)
03041 Spliceosome [BR:
pprm03041
]
120468643 (ncbp2)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
120468643 (ncbp2)
Spliceosome [BR:
pprm03041
]
Common components
Common spliceosomal components
Cap binding complex
120468643 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120468643
NCBI-ProteinID:
XP_039513112
LinkDB
All DBs
Position
Unknown
AA seq
155 aa
AA seq
DB search
MSIKLNALYSDSYVDISQYRDQHFKGNRYEQEKLLKQSSTLYVGNLSFYTTEEQVYELFA
KSGDVKRIVIGLDKVKKTACGFCFVEYYTRADAEQAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLVQKA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaaattgaacgctctctacagcgactcatatgtggatataagccagtacaga
gaccagcattttaagggtaacaggtacgagcaggagaagctgctgaagcagagctcgacg
ctgtacgtgggaaacctgtccttctacactacagaggagcaggtgtatgagctcttcgcc
aagagtggagacgtcaagaggatcgtcatcggcctcgacaaggtcaagaagaccgcctgt
ggcttctgttttgtcgagtattacacgcgagccgacgcggagcaggccatgaggtttgtg
aacggcacgaggctggatgaccggatcatccgcacggactgggacgcgggctttaaagag
ggccgacagtacggccggggcaagtccggcggccaggtgcgggatgagtacaggcaggac
tacgaccccgccagagggggttatgggaaactggtgcagaaagcctga
DBGET
integrated database retrieval system
