Pimephales promelas (fathead minnow): 120468646
Help
Entry
120468646 CDS
T08155
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120468646 (hps3)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
120468646 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
120468646
NCBI-ProteinID:
XP_039513114
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MVHVYNCHPFASQRIVPAEQEPGLVCCGGGALFVVSAGGCRIEAYSLRDREEQEGGCPLI
CRFSTVGSVLSIRHSTVGDYLVTIEEKNKATYLRAYTNWRYQAVEKTRVGVRLLGHLLRG
SSFRGAPKEQMEIIEIPLFEPPLCMACCNVTGDLLVGCAKSLVVFSLKRQTLSEQFSVLD
FERVLILHIQGWSPSQVAFCAGYVALQTELEVLVVKLTPRQKSSQDSTAEQHSLLPEDIM
PETSLDEDAEMKKDGFSPLHEQEDFFLFPKHQEMLGNEAQECGISLVLEWTGMEAESRGD
MSVVYILFRRFAPDFFQGCSVEETHLHSLQLHPTFTGKQEEASISKVGEPTCMFVFFSLP
NTGYMYSLKSAVELVSTYQYPEKTHQAVLSDQFLYIITRNALQCFTVRCSAVAARVDDPY
IDTTMKACPPSTMEVCALRIQLFIGLKVLCQDGNHIVLLTAADVDSKEDIERSARKNTES
RELRALTGILVAVGLEPSSTQTLESLLSRSFLSRKISISKPTEPTDSGHGWNLYVITSVS
TLQLYREIVEYSRRYEQSSPSSQSCVHLLSEGHLLLRTALQRGGPDPDPDPEPAERRAQL
QQAFQESCAHLGDCFSRFDKKDYHLALPYYKMSGLSVTDVIKRNMFMSSSSNGYGKGFLF
FLKHSIYEENMEELSKDMADKVLEIFSVAEPAQLAHVVSSPSMLKADPAGAIALLRQLEA
PGAPSITLSLCIASLALRDGDLHTYSQQMDRHAEMLQVYGFIEEPKLLLHGRGKAVLPTT
LARHLRDTHKGLLVAAVVALHENSKIRLEEADLFFQELCKNGVVVESSPQLLVDFWEALL
VASSLESIIQELLFRLTSVYIDRITCRERSGVKAIKTAEDLINSCSHYGTLYPWVSILTP
VQLNVTHEHQEDLLKLQSLLCGPTLEVSSILPLLEQLSDSDATGLSIHVLCATRLGQHHS
SIDRLLDRCPQAIISYANHELQNDKLPLWWQKLFPEVCERMRTTGIHNAVLLSALKETLL
VAARELNPLEFLDLLPDDGTAHFFLPHLLECCQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtgtataactgccacccgttcgcgtcgcagcgcatcgtgccggcggagcag
gagcccgggctggtgtgctgcggcggcggggcgctgttcgtggtgagcgccggaggctgc
aggatcgaggcgtacagtctccgggaccgggaggagcaggagggggggtgtccgctcatc
tgccgcttcagcaccgtgggctcggtgctcagcatccgacacagcactgtgggggactat
ctagtcactattgaagagaagaacaaggccacttatctcagggcctacactaactggagg
taccaggctgtggagaagactcgcgtcggggtgcgtctgttgggtcacctcctgcggggc
tcgtccttccgcggagctcccaaagagcagatggagatcatcgagatccctctgtttgag
ccgccgctctgtatggcatgctgcaacgttaccggtgatcttctagtgggctgtgccaag
agtttggtggtcttcagtctgaagcggcagacgctgagcgagcagttctctgtgctggac
ttcgagagggtccttatccttcacatccagggctggagcccgtctcaggtggccttctgt
gctggatacgtggcccttcaaacggagctggaggtgctggtggtgaagctcaccccacgg
cagaagagcagccaggacagcacagcagagcaacactcactgctgccagaagatatcatg
cctgaaaccagcttagatgaagatgcagagatgaaaaaagatggattcagccccctccat
gagcaagaggacttctttctgttcccgaagcatcaggagatgttgggtaatgaagcccag
gagtgtggcatctctctggttctggagtggactggaatggaggcggagagccgaggagac
atgagcgtggtttacatcttattcaggaggtttgcgcctgatttcttccaaggttgcagt
gttgaggagacacatttgcattccctacagctccaccccacgtttactggtaaacaggaa
gaagcctccatctccaaagttggggaacctacttgtatgtttgttttcttctcgttgccg
aacaccggctacatgtacagcttgaagagcgcggtggagctcgtgtctacctaccagtac
ccagaaaagacccaccaggctgtgcttagtgaccagttcctctacatcatcaccaggaat
gctctccagtgttttaccgtcaggtgcagtgcggtagcggctcgggtcgatgacccatac
atcgacaccaccatgaaggcctgtccgccgtccacgatggaggtgtgcgctctgaggatc
cagctcttcatcggactcaaggttctctgtcaggatggaaatcatattgttctcctgaca
gcagcggacgtggacagcaaagaggacatcgagagatcagcccgcaaaaacactgaatcg
agggaactcagggccctgacaggcattttagtagctgtaggtctagagccgtcctcaacg
cagactctggaaagccttctgtccaggtccttcctatcccggaagatctccatctccaaa
cccacagagccgacggacagcggtcacggctggaacctctatgtcatcacttctgtgtcc
acactgcagctctacagagaaatagtggaatacagcaggagatacgagcagtcgagcccg
tcgtctcagagctgcgttcacctgctgagtgaaggtcacctgctcctgcgcacagccctg
cagcgggggggccctgaccccgaccccgaccccgagcctgcggagagaagagcgcagctg
cagcaggcatttcaggagagctgcgctcacttaggagactgcttcagcaggtttgataag
aaggactatcatctggctcttccgtactataagatgtcaggcctcagtgtgactgatgtc
attaagaggaatatgttcatgagcagctcctcaaacggttacggcaaaggctttctcttc
ttcctgaagcattcgatctatgaggagaacatggaggagcttagcaaggacatggctgat
aaagtcctggagatcttcagtgtggctgaacctgctcagcttgctcatgttgtgagcagc
ccgtccatgctgaaggccgaccctgccggggccattgccctcctgaggcagctggaggcc
cccggggccccgtccatcaccctgtccctgtgtatcgcctccctggccctgcgggacggg
gacctgcacacttacagccagcagatggaccgccacgctgagatgctgcaggtgtacggc
ttcatcgaagagcccaaactactgctccacggcagaggcaaggcggttctgcccaccaca
ctggcccgccacctgcgcgacacacacaaggggctgctggtggcggcggtcgtggctctg
cacgagaacagcaagatccgactggaggaggccgatctcttcttccaggagctgtgtaag
aatggcgttgtggttgagagcagtcctcagttactggtggacttctgggaggctctgtta
gtagcgtcctctcttgaatccatcatccaagagctcctcttccgtctcacgtctgtttat
atcgatcgcatcacgtgcagagagcgctccggcgtcaaagccatcaaaacggcagaggat
ctgataaactcctgttctcattatgggacgttgtatccgtgggtgagcatcctgacgcct
gtccagctcaacgtcacccatgagcaccaggaggacttactcaaacttcagtctctgctg
tgtgggccgacgctggaggtctcctccatcctgcctctgctggagcagctgtcggactcc
gacgccaccggcctcagcatccatgtgctctgcgccaccagactgggccaacaccacagc
tccatcgacaggcttctggaccgatgcccacaagccatcatctcctacgccaaccacgag
ctgcagaacgacaaactgcctctgtggtggcagaagcttttccctgaggtgtgtgagcgg
atgaggacaacaggaatccacaacgccgtcctcctctcagcactcaaagaaactctgctt
gtggcggcccgagagctgaacccgttggagttcctggacttgttgccggatgatggaacg
gcacactttttcctgccacatctgcttgaatgctgccaatga
DBGET
integrated database retrieval system
