Pimephales promelas (fathead minnow): 120468776
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Entry
120468776 CDS
T08155
Symbol
si:ch1073-82l19.1
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120468776 (si:ch1073-82l19.1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120468776 (si:ch1073-82l19.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
120468776
NCBI-ProteinID:
XP_039513292
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MDDESPPSLTNISLAWLCHNVEVLCVEQDNGSLQLRHCPLFPQELADQLLHRMAHEGVLN
DRTVSIFQNLEHLRLRRAHIQSSHLSAEAFRLALCPHKLQELNASHIHSDLTISDILHSI
TSSKACRQGLQTLLMNGLHLYGEAGEGSLQASFSMLRGLKKLSLAWTDLEDRGLEDICAM
AMLESLDISGTNVTDLRPLLNCESRLRSLTVHGLQKLEMPTSSLILVLSKLQLLRHLDIS
NDKLVMDGDNLVQQLLERPEILLHLVSLDVSGWRGLSDATVQAFLEVRPGMRFIGLLATG
AGGSELLCGDGDLKVAGESNLTQLCEALRRYSDRESFMLEILKHLYSHTNNLERPQPNII
KLVLAGMKHHTDSLHVQLVATACVFNLTVQEMVLGMSLHLVGTVVQQLLTAMKNFPNHEQ
LQKNCLLTLCSDHILQVVPFDRYEAAKLIMMLLGNHGDQTVQRMAVAVVSVLVSKLSTEE
ISELGAEAFIMKQLLSIVQQKASLGVVDSTLKFALSALWNLTDETPTACLHFIQCQGLEL
YMELLESYYSEFSIQQKLLGLLNNVAEVEELRTELMDEDLVEHILSLLINPEVEVDVRYF
AGGILAHLTSVRGPEWRLDAELHCTVQEKLHSSILSWSSPEHAMVSYRTLQPFYPLLHIS
QCSGVQLWALWAIQFVCSQNAPQYCSMLQTEGGTDRLRVLSTHPDTHSDVKCLVENIFKI
LERNLHSASPGSKCTTISLQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagagtcccccgtccctgactaacattagcttggcctggctgtgtcacaac
gtggaagtgctttgtgttgaacaagacaatggatcgctgcagctccgccactgtccttta
tttcctcaagagttggctgatcagctgctgcacaggatggctcatgagggggtcctcaat
gatagaaccgtcagcattttccagaacctggagcacttgcgtctgcggcgagcgcacatc
cagtcctcgcacctctcagccgaggccttcagactggctctctgccctcacaagcttcaa
gaactgaatgcttcacatatacacagtgacctcacaatctcagatattctccacagcatt
acctccagcaaagcgtgcagacagggccttcagactctgctgatgaatggcctgcatctg
tatggggaagcaggcgaggggtccctgcaggcctccttcagcatgctccggggcttaaag
aagctctctctggcctggacggacctggaggacagaggtctggaggacatctgcgcaatg
gccatgctggagagcttagatatctccggtactaacgtcacagatctaagacctcttttg
aactgtgagtctcggctaaggtctctaactgtgcatgggcttcagaagttagagatgccc
acctccagcctcatcttagtgctctccaagctgcagttgctgaggcacctggacatctct
aatgacaagctggtaatggatggagacaacttggtgcagcaactgctcgagcgcccagag
atccttctgcatcttgtgtccctggatgtgtcgggctggagaggtttaagcgatgctact
gtccaagcctttttggaggtgcggcctgggatgaggttcattgggctgctggccacgggt
gcaggtggctctgagctgctgtgtggagatggagatctgaaggtggctggagagtccaat
ttgacccaactgtgtgaagccttgaggagatacagcgaccgagagagtttcatgctggag
attcttaaacatctttacagtcacaccaacaacttggaaagacctcagccaaacataata
aagttggtattggctggaatgaaacaccacacagattctctccatgttcagcttgtggcc
actgcatgcgtgtttaacctgaccgtacaggagatggtactgggaatgtccttacacctg
gtgggaactgtagttcaacagcttctcacagccatgaagaacttcccaaaccacgagcag
ttgcagaagaattgcctgcttaccctttgcagtgaccatatcttacaggttgtcccattt
gacagatacgaagctgctaagttgataatgatgttgctggggaatcacggagatcagacg
gtgcagagaatggcggtggctgtagtctccgtactggtgtctaagttgagtacagaggag
atctcagaactgggtgcagaggcatttataatgaagcagttgctgagcatcgttcaacag
aaggcctcactgggtgtagtggattcaactctgaagtttgcattaagtgctttgtggaat
ttgacagatgagacacccactgcttgtctacatttcattcagtgccaaggactggaactc
tacatggaattgctagagtcatattattccgaattctccatccagcagaagctcctgggc
cttttgaataatgtagcagaggtggaggagctgcggacggagctgatggatgaggacctg
gtggagcacattctctcactcttaatcaacccagaggtggaggtggatgtccgttatttt
gctggagggatcctggcacatctcacctcagtcagggggcctgagtggcgtctggatgct
gagctgcactgcacagtgcaggagaaactgcactcttctatcctgtcatggagttctcct
gagcatgcaatggtttcctaccggacgctccagcccttctatcctttgctacacatctct
cagtgttctggtgttcagctttgggctctctgggccatacaattcgtctgctctcagaac
gcccctcaatactgcagtatgctccagacggagggaggaacagaccgactgagagtcctg
agcacccatccagacacccacagtgatgtgaagtgtctggtagaaaacatctttaagatc
ctggagcgaaaccttcattccgccagcccaggttcaaaatgtactaccatctctctgcaa
tga
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