Pimephales promelas (fathead minnow): 120468986
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Entry
120468986 CDS
T08155
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120468986 (mms19)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120468986 (mms19)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120468986 (mms19)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120468986 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
HEAT_ECM29
NOL11_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
120468986
NCBI-ProteinID:
XP_039513589
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAADNSLLLGLVEEFVSGQVDSKATETASGVKTGQFTILQLVEALGLSLTSSQPHTRARG
VQLLSQVLQECYSCLSEREVEVLIAFYENRLKDHYVITPHVLQGLKALTKCSVLPPGSAV
SILRSIFQDVHVQSLMLAERSCVYNILISLMESREEELKGLGADFTFGFVQSVDGERDPR
NLLLAFQVARNIIHRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEDLILSLRNV
LTGTSRFAEFLLPLIIEKLDSDVQSAKVDSLQTLAACGLTYSHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALGALTSCLSRSVLSSDSEDSLQVFLNLVLKDCQHHLCEPDLKLV
WPSTKLLQAAAGASYRASLIVSTAVIPALLEQYNNRTQCAQRRTLLEVLQGFVQPTPLSR
PPDGVESVLVAFQQSLCSVVFSALVESSAGLQVTATRVLTALGQQPGLLAQTDVEKAVDH
LTRLILEEEDTQVSLAVVECSGSLAHLHPKAFISRMIPRLKEEILSGETQFAHTHTHTHK
HTQCSLTDNLGLLSSTESNAAVRLRCVTAVASVSSQLSVVEESTPVLLQVLASAHTGSCS
FSVEEVSAVCISLQRIAAHARDTEEIGRFFHSNIIPRLLGLALQAELQSRDSGHSNPLTD
EAVLSALVPVISTACAALQSESASRMAAQAVSLFLDGDVSFLPENAFPSQIQLLQSQAEC
RGPSQLVCLLMACVCSLPRSVDIPEIDRLLVQLEDLICSCSHQFCYTFAAKCFAGLVNKR
PAGEALDAVLERVLKRISVELENGSSSQRTQAFTLLLWVAKALLLRYHPLSTALTDKLFA
LLSDPELGSQAADGFCVLMSDSPDVLNRGCHADVRIMYRQRFFAENSSKLVEGFNSAEQE
KKSCYLKALSHIVNNLPREVQLTELPALLPLLLEALSCPDREVQFSTLSCMQPVLLEPPE
ALKNQLEALFSRMLALTTSPHMKVRIASIRCVHALSRLPEHVILPFRARVLKALGVCLDD
RKRLVRNEAVAARGQWFLLGSPGGR
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggataacagtttgctcctgggtttagtggaagaattcgtgtctggacaggtt
gatagcaaggctacagaaaccgcttcaggtgtcaagactgggcaattcacaatcctccag
ctggttgaagcattggggttgagtctgaccagctctcagcctcatacgcgtgccagagga
gttcagctcctgtctcaagtcctgcaggaatgctacagctgcctatctgagagggaggtg
gaggtcctgatagctttctatgaaaacagactgaaggatcactatgtgatcactccgcat
gttctccagggactcaaagctttgacgaaatgctcagttctgcctcctggttcagctgtg
tccattttgagatccatctttcaggatgttcatgttcagtccttgatgctggcggagcga
tcatgtgtttacaacatcctcatcagccttatggagtcccgagaggaagagctcaaaggt
ttgggtgcagactttacatttggatttgtgcagtcagtagatggagagcgagatcctcgt
aacctcctgctagcgttccaggtggccaggaacatcattcacaggggatacgatcttggt
aaatttgtagaggaactctttgaagtgacgtcctgttattttcccatagactttagccct
ccacccaatgatcctcatgggatcacacaggaagatcttatactttctctacgaaatgtt
cttactgggacgtctcggtttgctgagtttctgttaccattgatcattgagaagctggac
tcggatgttcagagtgccaaagtggactccctgcagacactggccgcctgtggtctgaca
tacagccataaagagctggcagagttcctcccgggcctttggagctcgatacggagagag
gtgttccagacggccagtgagagggtggaatcggccggtctgtcggctctcggggcgctg
acgtcctgtctgtcccgttctgtgctcagttcagactctgaggattccctgcaggtgttt
ctaaacctcgtcctcaaagactgtcagcaccatctctgcgagccagacctgaagctggtg
tggcccagtaccaaactcctgcaggccgccgccggagcctcgtacagagcgagtctgata
gtgtcgactgcggtcataccggccctcctggagcagtataataacaggacacagtgtgct
cagcggcgcaccctgctggaggttctgcagggtttcgttcagccgaccccgctcagccgg
cctccagatggagtggagagtgtgttggttgcgtttcagcagtctttgtgcagcgtggtg
ttttcagcgctggtggagtcaagtgcaggtctacaggttacagccacacgtgtgcttact
gcactgggacagcagcccggcttgttggctcagacagatgttgagaaagctgttgatcat
ttgaccagactcattctggaggaagaagacactcaagtgagtttggctgtagtggagtgt
tcaggctctctggctcatctgcatcccaaagccttcatctccaggatgattcctcgactc
aaggaagagatcttatcaggtgagacccagttcgcacacacacacacacacacacacaaa
cacacacagtgcagtttaacagataatctgggactactttcctcaacagagtctaacgca
gctgtccgtctgcggtgtgtgacggcggtagcgtctgtgtcgtctcagctcagtgttgtg
gaggaaagcacccccgtcctgctacaggtgctggcttcagcacacacaggtagctgcagt
ttctcggtggaggaagtgagcgcggtatgcatcagtttgcaacggatagcagcgcacgca
cgcgacaccgaggagatcggacgattctttcatagcaacatcattcctcgacttctagga
ctggccttacaggcagagctgcagagtagagactcaggtcacagtaatccactcacagat
gaagccgttctttctgctttagttccggtcatcagcacagcctgtgctgcgttacaatca
gaatcagcgtcccgcatggcggcccaggctgtttctctgttcctggatggagatgtgtcg
tttctgccagagaatgccttcccttcccaaatccagttgctccagagccaggcagagtgt
cggggtccgtctcagttggtgtgtctgctgatggcctgtgtttgctctcttccacgcagc
gtggatatccctgagatcgacaggcttctggtccagttggaggatctgatctgttcgtgt
tcacaccagttctgctacacgtttgcagcgaaatgcttcgctggattggtcaacaagagg
ccggcaggtgaagctcttgacgcagtgctggagagagtgttgaagaggatcagtgtcgag
ctggagaacggttcctcttcccagcgaacacaagccttcacactgctgctctgggtggcc
aaagctctcctgttacggtaccatccgctatcaacagccctgactgacaagctctttgct
ctgttgagcgacccggagttaggatctcaggcggccgatggcttctgcgtcctcatgagc
gactcgccagacgtgctcaaccgcggctgccacgccgacgtgcgcatcatgtacagacag
cgcttctttgctgaaaactcaagcaaacttgttgaaggcttcaactcagcagagcaggag
aagaaatcttgttatctgaaagccctgtcacacatcgtgaacaaccttccccgagaggtg
cagctcacagagcttcctgcgctgctgccgctcctgctggaggcgctgtcctgtcccgat
cgagaggtccagttctccaccctgtcctgcatgcagccggtgctgctggagcccccggag
gccctcaagaaccagctggaggcgctgttctcacgcatgctggccctcaccaccagccct
cacatgaaagtgagaattgcatctatccgctgcgttcatgctctctctcgcctgcctgaa
catgtgatcctgccgttccgtgccagagtgctgaaagctctcggtgtgtgtctggatgac
cgaaagaggctggtgaggaacgaggctgtggcggctcgagggcaatggtttttgttagga
agccccgggggaagataa
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integrated database retrieval system