KEGG   Pimephales promelas (fathead minnow): 120468986
Entry
120468986         CDS       T08155                                 
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprm03036]
    120468986 (mms19)
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120468986 (mms19)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120468986 (mms19)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120468986 (mms19)
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_2 HEAT_ECM29 NOL11_N Sec7-like_HUS
Other DBs
NCBI-GeneID: 120468986
NCBI-ProteinID: XP_039513589
LinkDB
Position
Unknown
AA seq 1045 aa
MAADNSLLLGLVEEFVSGQVDSKATETASGVKTGQFTILQLVEALGLSLTSSQPHTRARG
VQLLSQVLQECYSCLSEREVEVLIAFYENRLKDHYVITPHVLQGLKALTKCSVLPPGSAV
SILRSIFQDVHVQSLMLAERSCVYNILISLMESREEELKGLGADFTFGFVQSVDGERDPR
NLLLAFQVARNIIHRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEDLILSLRNV
LTGTSRFAEFLLPLIIEKLDSDVQSAKVDSLQTLAACGLTYSHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALGALTSCLSRSVLSSDSEDSLQVFLNLVLKDCQHHLCEPDLKLV
WPSTKLLQAAAGASYRASLIVSTAVIPALLEQYNNRTQCAQRRTLLEVLQGFVQPTPLSR
PPDGVESVLVAFQQSLCSVVFSALVESSAGLQVTATRVLTALGQQPGLLAQTDVEKAVDH
LTRLILEEEDTQVSLAVVECSGSLAHLHPKAFISRMIPRLKEEILSGETQFAHTHTHTHK
HTQCSLTDNLGLLSSTESNAAVRLRCVTAVASVSSQLSVVEESTPVLLQVLASAHTGSCS
FSVEEVSAVCISLQRIAAHARDTEEIGRFFHSNIIPRLLGLALQAELQSRDSGHSNPLTD
EAVLSALVPVISTACAALQSESASRMAAQAVSLFLDGDVSFLPENAFPSQIQLLQSQAEC
RGPSQLVCLLMACVCSLPRSVDIPEIDRLLVQLEDLICSCSHQFCYTFAAKCFAGLVNKR
PAGEALDAVLERVLKRISVELENGSSSQRTQAFTLLLWVAKALLLRYHPLSTALTDKLFA
LLSDPELGSQAADGFCVLMSDSPDVLNRGCHADVRIMYRQRFFAENSSKLVEGFNSAEQE
KKSCYLKALSHIVNNLPREVQLTELPALLPLLLEALSCPDREVQFSTLSCMQPVLLEPPE
ALKNQLEALFSRMLALTTSPHMKVRIASIRCVHALSRLPEHVILPFRARVLKALGVCLDD
RKRLVRNEAVAARGQWFLLGSPGGR
NT seq 3138 nt   +upstreamnt  +downstreamnt
atggccgcggataacagtttgctcctgggtttagtggaagaattcgtgtctggacaggtt
gatagcaaggctacagaaaccgcttcaggtgtcaagactgggcaattcacaatcctccag
ctggttgaagcattggggttgagtctgaccagctctcagcctcatacgcgtgccagagga
gttcagctcctgtctcaagtcctgcaggaatgctacagctgcctatctgagagggaggtg
gaggtcctgatagctttctatgaaaacagactgaaggatcactatgtgatcactccgcat
gttctccagggactcaaagctttgacgaaatgctcagttctgcctcctggttcagctgtg
tccattttgagatccatctttcaggatgttcatgttcagtccttgatgctggcggagcga
tcatgtgtttacaacatcctcatcagccttatggagtcccgagaggaagagctcaaaggt
ttgggtgcagactttacatttggatttgtgcagtcagtagatggagagcgagatcctcgt
aacctcctgctagcgttccaggtggccaggaacatcattcacaggggatacgatcttggt
aaatttgtagaggaactctttgaagtgacgtcctgttattttcccatagactttagccct
ccacccaatgatcctcatgggatcacacaggaagatcttatactttctctacgaaatgtt
cttactgggacgtctcggtttgctgagtttctgttaccattgatcattgagaagctggac
tcggatgttcagagtgccaaagtggactccctgcagacactggccgcctgtggtctgaca
tacagccataaagagctggcagagttcctcccgggcctttggagctcgatacggagagag
gtgttccagacggccagtgagagggtggaatcggccggtctgtcggctctcggggcgctg
acgtcctgtctgtcccgttctgtgctcagttcagactctgaggattccctgcaggtgttt
ctaaacctcgtcctcaaagactgtcagcaccatctctgcgagccagacctgaagctggtg
tggcccagtaccaaactcctgcaggccgccgccggagcctcgtacagagcgagtctgata
gtgtcgactgcggtcataccggccctcctggagcagtataataacaggacacagtgtgct
cagcggcgcaccctgctggaggttctgcagggtttcgttcagccgaccccgctcagccgg
cctccagatggagtggagagtgtgttggttgcgtttcagcagtctttgtgcagcgtggtg
ttttcagcgctggtggagtcaagtgcaggtctacaggttacagccacacgtgtgcttact
gcactgggacagcagcccggcttgttggctcagacagatgttgagaaagctgttgatcat
ttgaccagactcattctggaggaagaagacactcaagtgagtttggctgtagtggagtgt
tcaggctctctggctcatctgcatcccaaagccttcatctccaggatgattcctcgactc
aaggaagagatcttatcaggtgagacccagttcgcacacacacacacacacacacacaaa
cacacacagtgcagtttaacagataatctgggactactttcctcaacagagtctaacgca
gctgtccgtctgcggtgtgtgacggcggtagcgtctgtgtcgtctcagctcagtgttgtg
gaggaaagcacccccgtcctgctacaggtgctggcttcagcacacacaggtagctgcagt
ttctcggtggaggaagtgagcgcggtatgcatcagtttgcaacggatagcagcgcacgca
cgcgacaccgaggagatcggacgattctttcatagcaacatcattcctcgacttctagga
ctggccttacaggcagagctgcagagtagagactcaggtcacagtaatccactcacagat
gaagccgttctttctgctttagttccggtcatcagcacagcctgtgctgcgttacaatca
gaatcagcgtcccgcatggcggcccaggctgtttctctgttcctggatggagatgtgtcg
tttctgccagagaatgccttcccttcccaaatccagttgctccagagccaggcagagtgt
cggggtccgtctcagttggtgtgtctgctgatggcctgtgtttgctctcttccacgcagc
gtggatatccctgagatcgacaggcttctggtccagttggaggatctgatctgttcgtgt
tcacaccagttctgctacacgtttgcagcgaaatgcttcgctggattggtcaacaagagg
ccggcaggtgaagctcttgacgcagtgctggagagagtgttgaagaggatcagtgtcgag
ctggagaacggttcctcttcccagcgaacacaagccttcacactgctgctctgggtggcc
aaagctctcctgttacggtaccatccgctatcaacagccctgactgacaagctctttgct
ctgttgagcgacccggagttaggatctcaggcggccgatggcttctgcgtcctcatgagc
gactcgccagacgtgctcaaccgcggctgccacgccgacgtgcgcatcatgtacagacag
cgcttctttgctgaaaactcaagcaaacttgttgaaggcttcaactcagcagagcaggag
aagaaatcttgttatctgaaagccctgtcacacatcgtgaacaaccttccccgagaggtg
cagctcacagagcttcctgcgctgctgccgctcctgctggaggcgctgtcctgtcccgat
cgagaggtccagttctccaccctgtcctgcatgcagccggtgctgctggagcccccggag
gccctcaagaaccagctggaggcgctgttctcacgcatgctggccctcaccaccagccct
cacatgaaagtgagaattgcatctatccgctgcgttcatgctctctctcgcctgcctgaa
catgtgatcctgccgttccgtgccagagtgctgaaagctctcggtgtgtgtctggatgac
cgaaagaggctggtgaggaacgaggctgtggcggctcgagggcaatggtttttgttagga
agccccgggggaagataa

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