Pimephales promelas (fathead minnow): 120469060
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Entry
120469060 CDS
T08155
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprm04054
]
120469060 (nlrc3)
Pattern recognition receptors [BR:
pprm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120469060 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
AAA_30
Motif
Other DBs
NCBI-GeneID:
120469060
NCBI-ProteinID:
XP_039513700
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MARHDHIPWEEYCYLDLKSNAQKQETSKRMEDPGWLRRHQALLQRFLSTSILVNVVHHMR
KADLLNTQEVGLIQEMGALKDKVHLLVEFLSVTDPHGAALQTYLQSSHQTEYNLITVHDS
VVRPHKDALLQRLKEDEKTQAGGSSHGSSFLLIECVSDLQQREHDLVQVSVNRGAGPLHG
RALGLDKLIVPLTRVSTAPRVTLTVGVAGSGKTRMVHRFVQLWSSGHIYPELSLAIPIAC
WELSSFDRLSVERLLRLFVPYDNMDVITFNESCKILLILDGLEEFRQSLDFADAPPTSDP
RREIPVSDLIANIVRGNLLPWATLWLLSRPGVGAKVPAGLVDRVTEAPPFSRTQIKNYID
HCVTNKLDVYSISHESSSSQTYTPEDVSSQVWTYLNSQKPLLILSSVPAVCHIIVTTLSR
LIKLDSDSTPLPRTLTEVYAHYCWPHLSGSDPASGGIRKPLSSLGRLAFYSLLRRRYTFS
ENELRTYGVDVPPQVGTLGHRILQRKQSWSYDSVVWQFTHTSVQEFLGALFYYISSRRGM
FDLFSESSVSWPRIGFHSHYRAALQKTNQSDAAAQGNLDLFMRFLSGLMSPAVTALLGGP
LGVSREEQVTQRTTATNLLQSTVTGTGGDAVSMRSVTIVTCLAELQQGEWLRSVEEDLIN
CGLRGKLKGGVCSVLAYLLQVSDACTEETQLSNCLDSSSLKRLLPQLLYCSNLRMENNEF
KEGAMELLGSLLSAKECHIQMLSLADNSISSKGVNPLSRALLVNRTLTTLDLRGNNIGAK
GAKTLSEALKMNQVLVSVNLQSNHIEDDGARVLADVLQSNRKLTTLNLQKNGIGAEGVKK
IAEALTKNQTLQDLNVSGNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIRALSHA
LQSNRGLSCLNLRENSIGVSGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRVN
RSITSLHLQWNFMKAGAAKALAQSLMSNTCVQLLDLQENALGDNGVIALACALRTNSSLG
VLYLQGVSAGKLGAVALANALVINETLHTLDLRGNSIGMEGAKAFSSALKNNRGLRSLNL
QENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKAGAPDCVVDI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggctagacatgaccatatcccatgggaggaatactgctacctggatctgaagtccaat
gctcaaaaacaagagactagcaaaaggatggaagatcccgggtggttacgcagacaccag
gctttgttgcaaaggttcttatccacctccatcttggtaaatgtggtgcatcacatgaga
aaagcagacctgctcaatacacaggaggtggggcttatccaggaaatgggggctttgaag
gataaagtgcatttattggttgagttcctgtccgtcactgatccacatggcgccgccctt
cagacttatcttcaaagttcacaccagactgagtacaaccttataactgtacatgactct
gtggttcgaccacataaagacgctctacttcagcgtctcaaagaagatgaaaaaactcaa
gccggtggaagctcacacggttcctctttcctccttattgagtgcgtatctgatcttcag
cagcgagaacacgacctcgtgcaggtgtcagtcaacagaggggcggggcctcttcacggt
cgagcgctgggattggacaagctgatcgtgcctttgacgagggtcagcaccgccccacgt
gtgacgctgaccgtgggcgtggctggcagcgggaagacccgaatggtccaccgtttcgtc
caactttggagcagcggtcacatctatccagagctgagtcttgcgatccccattgcatgc
tgggaattgagcagtttcgatcggttatcggtcgagcgcttgctacggttgttcgttccg
tatgataacatggatgtaattacttttaatgagtcctgcaaaatattactaattttggat
ggattggaagagtttcgccaatcgttggatttcgcagatgccccgcccactagcgaccct
cgtcgcgaaattccagtatcggaccttattgcgaatattgtacgaggtaatctgttgcca
tgggcaacgctgtggcttttgtcaaggcctggcgttggggcaaaagttccggcgggattg
gtcgatcgtgtgaccgaagccccgcctttttcgcgaacgcaaataaagaattatattgac
cattgtgtaacgaacaagttagatgtgtactctatatcacacgagagctcatcgtctcaa
acgtacacacctgaggatgtctcctctcaagtgtggacttacctgaattctcagaaaccg
ttgctcattttgtcttccgtccctgcggtctgccacattatcgtgaccacattatcgcgc
cttataaagttggattcagattccacgccccttcctcggactcttacagaagtctatgcc
cactactgttggccacacctctctggatctgacccggccagtggcggcatcaggaagccg
ctgagctctctgggtcgtcttgcgttttatagccttttacggcgacggtatacattcagc
gagaacgaattgcgaacttacggtgttgacgtacctcctcaggttgggacactcggccac
cgcatcctccagcgcaagcaaagctggtcgtacgatagcgtggtgtggcagttcacgcac
acgtctgtgcaggaattcctgggagctcttttttactacatttcatcaaggcgtgggatg
tttgatctgttctcggaaagtagtgtctcctggccccgcattggcttccacagtcactac
cgtgcagcgctgcagaaaaccaaccaatcggacgccgcagcgcaaggcaacctcgacctc
ttcatgcgcttcttgtcagggctgatgtctccggcggtcaccgctttgctaggtggtcct
ctgggcgtttcccgcgaggagcaggtgacccagcgcaccacggcgacaaatttacttcag
agtaccgtgacggggacaggaggtgacgccgtaagtatgcgcagcgtcacaatagtcacg
tgtctggcggagctgcaacaaggggagtggctacggtcagtcgaggaagatctcattaac
tgcggcctgcggggaaagctgaagggtggagtttgctctgtgctagcttacttgttgcaa
gtatcggatgcatgtacagaagaaacgcaactgtctaattgcctagactcctcctcccta
aagaggctcctcccacagctgctgtactgcagtaatctgagaatggaaaacaatgaattt
aaggaaggtgccatggagctgttgggaagtctgttgagtgccaaagagtgccatattcag
atgctcagtctggcagacaactcaatcagcagtaaaggagttaatccactcagtcgggct
ctactcgtcaaccgaaccctcacgaccctagacctccgtggaaacaacatcggcgccaag
ggagcgaagaccttgagcgaggctctcaaaatgaatcaggtcctcgtgtcagtcaatttg
cagagtaaccacatagaggatgacggtgctcgtgtgctggcggacgttcttcagtcaaac
cgaaagctcaccacactgaatcttcagaagaacggcattggagcagaaggagtgaaaaaa
atcgcagaggccctcacaaagaatcaaacgctacaggatctcaatgtgtccggcaatcat
ctgggtgatttgggaaccgtggctctggctcaagcacttatggtcaaccacgttctccac
acgctcagtcttcagagtaactctgtgagtgacagaggcattagagcgctctcacacgct
cttcagtcaaaccgaggactcagctgtctgaatctaagggagaattcaataggagtgtct
ggtgccaaagacatcgccaaagccttaaaagtcaacacgtgtcttagagaactcgatctg
actgctaatcttcttcatgatgagggtgtgacggccatcgctgaagccatgagggtcaac
cgatcgatcacgtccttacacctccagtggaacttcatgaaggctggagcagctaaagct
ttagctcagtctctcatgagcaacacctgcgttcagcttctggatctgcaggagaacgct
cttggtgataatggtgtcattgctctggcctgtgctctgaggacaaactcttctctcggt
gtgctctatcttcagggtgtatcagcaggtaaattaggagccgttgcactagccaatgct
ctggtcatcaatgaaacccttcatacactagatctgcgtggaaactccatcgggatggaa
ggagcgaaggcgttttccagcgctctaaagaacaacaggggtttgagaagtctgaatcta
caggagaactctctggggatggacggagcgatcttcatcgcgactgcactgagaggaaac
catcagctcacctacatcaatctccagggtaacggcatcggggagtcgggggcaaaggtc
gtgtcagacgccatcaaagccggtgcaccagattgtgtggtggatatctag
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