Pimephales promelas (fathead minnow): 120469175
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Entry
120469175 CDS
T08155
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120469175 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120469175 (cnot2)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120469175 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120469175 (cnot2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120469175
NCBI-ProteinID:
XP_039513927
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MHYVTNGMFSATRKKFGEGVESDYPDEIYYGQQSMFPHRSEKDMLPSPSPSLSGQLSQLG
ASLYGPQSALGFSTRGMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGIL
PMNTRNMMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSG
FGMGRSQGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAG
RAPYVGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSNLNSSGKGSSSADG
PKFPGDKTSSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMV
HLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAI
KLGRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTY
ERGTYYFFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcattatgtgacaaacggaatgttcagtgcaacgagaaagaagtttggtgagggggtc
gaaagtgactacccggacgagatatactatggccagcagtcaatgttcccgcatcgatcg
gagaaagacatgctgccatctccctcgccgtcattgtcaggtcaattgtcacaacttggt
gcgagtttgtatggtccgcaaagtgcactaggtttctcaacaagaggtatgagcaacaac
aatcctcaactgaaccggagtttaacacaaggcactcagttaccgagccatagcacccca
accacaggcgtcccaacaatgtccctccacacaccaccgtcgccgaacaggggcatcctt
cccatgaacaccaggaacatgatgagctcgcaggtagggcagggcatgggtatgagcggc
aggaccaacagcatgggcagctctggcctgggcagccctaaccgcagctctcccagcatt
atctgcatgcccaaacagcagccagcacgccagccattcaccatcaacagtatgtcagga
tttggaatgggccggagccaggggtttggaatgaactccttatccaataacatcttcaac
gggacagacgggagtgaaaacgtgacaggaatagatctctcagaattcccagcacttgca
gacagaagtcgaagggagggaaacggcaacccaacaccgttgcataatccgctggctgga
agggcaccctatgttggaatggtcacaaagccctcgaacgaacagtcgcaggacttctca
attcacaacgaagacttcccagccctacccgggcccaactacaaggacccgacattgagc
acggatgaaagcaaatcaaacttgaactcatcaggcaaaggcagctcaagtgcagatgga
cccaaatttcctggcgacaagacatcatcagcacagaataacaaccagcaaaagaaaggg
atccaggtgttgcccgatggcaaggtaacaaacattccctcaggaatggtgacggatcag
tttggaatgattgggctcctgacattcatccgggcagctgagacggaccctgggatggtt
cacctggctttaggaagcgacctaacaacgctaggactcaacctcaactctccagagaat
ctgtatcctaagtttgcatctccctgggcttcagctccatgtcgaccacaagacattgac
ttccatgttccttcagagtacttaaccaacattcacataagggacaagctggctgcaata
aaactggggcgatatggtgaagacctgctgttctacctctactacatgaacggaggagac
ctcttacaactcctcgctgccgtcgagcttttcaaccgggactggcggtaccataaagag
gaaagggtttggattacaagagcacctggcatggagcccacgctaaagaccaacacctac
gagagaggaacatactacttctttgattgtcataactggaggaaggtcgctaaggagttt
cacctggaatacgacaagctagaggagcggcctcacgtgccaaccaccttcaattacaat
ccggcccagcaggccttctga
DBGET
integrated database retrieval system
