Pimephales promelas (fathead minnow): 120469279
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Entry
120469279 CDS
T08155
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120469279 (apex2)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120469279 (apex2)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120469279 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120469279
NCBI-ProteinID:
XP_039514099
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRGGYSGVATYCKDTATPFLAEEGLTGLLTNQGEAVGCYGDQVELSSEELLALDNEGRTV
ITQHHFMGTDGPQKLTVINVYCPRADPDKPERKQFKLQFYHLLQCRAEAILSSGSHVIVL
GDVNTSHRSIDHCNPDDVDNFEDNPGRKWLDHFLFETENTENGNTEDDLADISQNSASGG
KFVDSFRHFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFADRSLVETGFIGVDIMPEVEG
SDHCPVWAQLSCTLQFSPRCPPLCTRHMPEFIGKQQKLSRFLVKVTEKQSVSKGSLPGSQ
DAGEIRENLNPVVQGNSVAKKRPTEREADTNGPKVKRSKQTKTESSAKGSLLAFFKPKQT
LLIPSRGNLGLKQAESSQDGPGIESNIRSCPSDAQKETNLSMVTEMENENQDEVEGESTS
IDKSKDSKKGPCTGFWKTVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCARPQG
HASNPQARCNFFTWVEKGK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacatggaacataaacggaatacgaacatttaaaaatggtatcaagaaa
attctggattcattcgatgccgatataatctgcgttcaagagactaaagttacccgtgac
cttttggatgagaaaacagcgattgttgatggctacaattcatattttagttttagccga
ggacgaggtggatactcgggtgtcgcgacctactgtaaagataccgctactccattcctg
gccgaggaaggattgacaggtctgctcaccaatcagggagaggctgttggttgctatggt
gaccaggtagagttgtctagtgaggagcttctggcactagacaatgaaggaaggactgtc
atcacccagcatcacttcatgggcacagatggaccacagaagctgactgttatcaatgtt
tattgtcctcgagctgacccggacaaacctgagagaaaacaattcaagctgcagttttac
cacctcctccagtgcagagctgaagccatcttgagctcagggagtcatgtgatcgttttg
ggtgatgtaaacacctctcacagatccatagaccactgcaacccagatgatgtggataac
tttgaagataatcctgggaggaagtggctggatcatttcctgtttgaaacagaaaataca
gaaaatggaaatactgaagatgatcttgcagacatctcccagaattctgcctctggtggc
aagtttgtggactctttccggcattttcacccaaagcgttccaatgcattcacgtgctgg
tctacacttacgggtgccaggcagaccaactacggcacacgcatcgactacatcttcgct
gaccgctctctggtggagacaggctttattggcgtggacattatgccagaggtggaggga
tccgatcattgtcctgtatgggcgcagctcagctgtaccctccagtttagtcccagatgc
ccgcccctctgcacacggcacatgccagagttcatcggcaaacagcagaaactttcacgc
ttcttagtgaaagttactgagaaacagagcgtttctaaagggagtctacctggatcacag
gatgctggggaaattcgggaaaacctgaatcctgtggtgcaggggaacagtgttgcaaag
aagagacctacagagagagaagcagacacaaatggacccaaagttaaaagaagcaagcag
acgaaaaccgaaagtagtgctaaaggaagtcttttagctttctttaagcctaaacaaaca
ctgttgataccttcaagggggaacttgggcttaaaacaggcagaatcctctcaggatggg
cctggtattgagagcaacattaggagctgccccagtgatgcgcaaaaggagacaaatctc
tccatggtaacggagatggagaatgaaaatcaggatgaagtggaaggagaatctacatcc
atagacaagtcaaaggacagtaagaaaggcccatgcactggtttttggaaaactgttttg
catgggcctcctcagccaccactttgtaaatcacacaatgagccctgtgttttaaggact
gtgaaaaaagcaggacctaatctaggccggcagttttttgtatgtgcccgtcctcaaggc
catgcctccaatcctcaggccaggtgcaatttttttacatgggtagagaaaggaaaatag
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