Pimephales promelas (fathead minnow): 120469339
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Entry
120469339 CDS
T08155
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120469339 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120469339 (chrne)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120469339 (chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120469339
NCBI-ProteinID:
XP_039514206
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MAMADRFGRTCVFAFALVATVLVLQVSGNEERQLIADKFKNYNKNIRPARNIDEKVKVQV
KLTLTNLISLNEKEETLTTNVWIEIQWQDYRLAWNTSEYHGIDTIRVPYNTVWLPDIVLE
NNIDGKFDVAYYANVLISSDGSMYWLPPAIYRSTCTIEITYFPFDWQNCTLVFRSQTYSA
NEIVMVLAEDAETGKPIEWVEIDPEAFTENGEWAIKHRPARKMIDSRYSPDDLEYQEVYF
NLIIQRKPLFYIINIILPCSLISSLVVLAFFLPAQAGGQKLTVSISVLLAQTVFLILIAQ
KIPETSLSVPLIGKYLIFVMSMTTLIVTNCIIVLNFSLRSPSTHNMSHTIKHIFLVVVPR
FLGMASLVDEEEPVGGTYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRS
IVDEIDVSSTANLYKSLAKTAPEIKECVDACNFIAESTKHQNDIGSEMESWVLIGKMIDK
VCFWAAILLFSVGTVAIFLMGHFNQAPEYPFSWENKKYLPE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccgaccggttcggcaggacgtgtgtatttgcttttgcgctcgtggccact
gtattggtattacaagtcagtggaaatgaggagaggcagttgattgcagataagtttaag
aactacaataaaaatattcgaccagcaagaaacattgatgaaaaagtgaaggttcaggtc
aagttgacccttaccaacctcatctccttgaatgaaaaagaggagactctcactacaaat
gtttggattgagattcaatggcaggattaccgtcttgcatggaatacatctgaatatcac
ggcattgatacgatccgtgtgccatacaacactgtgtggctaccagacatagttttggaa
aacaacatcgatggcaagtttgatgtggcatactacgctaatgtgttgatatcgagtgac
ggctccatgtactggcttccccctgccatctatcgcagtacctgtaccattgagatcacc
tacttcccttttgactggcagaactgcacactagtcttcaggtctcagacatacagtgca
aatgaaattgttatggtattggcagaagatgcagaaacagggaagcctattgagtgggtg
gagatcgatcctgaggccttcacagaaaacggggagtgggcaatcaagcaccgtcccgcc
cgtaagatgattgactcgcgttactcgcccgatgacctagagtaccaggaagtgtatttc
aacctcatcatccagcgaaaaccactcttctacatcatcaacatcatcctgccctgctct
ctcatctcctctctggttgttctggccttttttctacctgcacaagctggagggcagaag
ttgactgtgtccatttctgtactgttggctcagactgtgtttctcattctgattgctcag
aagattccagaaacgtcactttccgtgcctctgattggcaagtatttaattttcgtcatg
agtatgacaacactgatcgtgaccaactgcatcattgtcctcaacttctccctccgcagt
cctagtacacacaacatgtcgcacaccatcaaacatattttcctcgtggtggtccctcgt
ttccttggtatggcctctcttgtggatgaggaggagccagttggagggacgtatgaaatg
agggagaggcgccgcagttcgtttgggctgatgcagagggcagaggaatatgttttgaaa
cagccacgcagtgagatgatgtttgataaacagagagaaagacatggactcatgcgctca
attgtggatgaaattgatgtgagcagtacggctaacctatataagagtctggcaaagaca
gcaccagaaataaaagagtgtgtggacgcctgtaacttcattgctgaatccactaagcac
cagaatgacatcggatcggagatggagagttgggttctgattggaaagatgattgacaag
gtttgtttctgggcagccatattgctattctctgttggaacagtggccatcttcctcatg
ggtcacttcaaccaggcacctgagtacccattttcttgggagaacaaaaagtacttgcct
gagtag
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