Pimephales promelas (fathead minnow): 120469419
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Entry
120469419 CDS
T08155
Symbol
fbxo11a
Name
(RefSeq) F-box only protein 11a isoform X1
KO
K10297
F-box protein 11
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120469419 (fbxo11a)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120469419 (fbxo11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
120469419
NCBI-ProteinID:
XP_039514326
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVPPDRNNAERDEADPAEMVAEESGQGAQNSPYQLRRKSLLP
KRTACPTKTNMEGASTSTTENFGHRAKRARVSGKSLDLPVTPAEQYLQVKLPDEVVLKIF
SYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPESGKFFQINPEEHEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGASPTIKHCNISDC
ENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcgactaaccgcagaccccggcgagtgtcgaggccgcgcccggta
ccgccggacagaaacaacgcagaaagggatgaggcagatcctgccgagatggttgcagaa
gaatctggtcaaggcgctcaaaatagtccgtaccaacttcgaagaaaatctctgttaccg
aagagaacagcttgtccaacaaagaccaacatggagggtgcttccacatcaacaacagaa
aactttgggcatcgggcaaaacgtgccagagtgtcgggaaaatcactagatttgcctgtc
accccagcggagcagtatctgcaggtgaagcttccagacgaggtggtcctaaaaatcttc
tcctatctgttggagcaggacctttgccgagcggcttgtgtgtgtaaacgatttagtgaa
ctagcaaacgaccccatcctctggaagagactctacatggaggttttcgagtacacgcgt
cccatgatgcaccccgagtctgggaagttcttccagatcaacccagaggagcatgaacag
cccaatccctggaaggagagctttcagcaactgtataaaggtgctcacgtgaagccgggc
ttcgcagaacatttctacagtaacccggccagatacaagggacgagaaaacatgctgtat
tacgacaccattgaagacgctctgggaggggttcaggaagcccactttgacggtttgata
tttgtccactctgggatctacacagatgaatggatctacatcgagtcgcccatcacgatg
attggcgctgctccggggaaagtagcggataaagtcatcatcgagaacactagagattca
acgtttgtgttcatggaggggtcagaggacgcatatgtaggatatatgacaataaagttc
aatcctgatgacaaatcagctcaacatcacaacgctcatcactgcctggagatcacggtc
aactgcagccccatcattgaccactgcatcatccgcagcacctgcacagtgggctctgca
gtgtgtgtaagtggccagggagcttcacccacgatcaaacactgtaacatcagcgactgt
gagaatgtaggactctatatcacggaccacgcgcagggcatttacgaagacaacgagatc
tccaataatgctctagcggggatctgggtgaaaaaccacggcaatcccatcatcagacga
aaccacatccatcacggcagagatgtcggggtgttcacgtttgaccacggcatgggctac
tttgagagctgcaacatccacaggaaccggatagcaggtttcgaggtgaaggcgtatgct
aaccccacagtagtgcgctgcgagatccatcacgggcagacgggcggcatctacgtgcac
gagaagggccgaggccagttcatcgagaacaagatctatgcaaacaacttcgcgggtgtg
tggattacctcaaacagcgaccccacgatcaggggtaacgccatttttaatggcaaccag
ggcggtgtttacatattcggcgacggccgaggtctcatcgaagggaacgacatctatggc
aacgctttagcgggaatccagatccggaccaacagctgcccgatcgtccggcacaacaag
atccacgacggacagcatggaggcatctatgtgcatgagaagggtcagggtgtgatcgag
gagaacgaggtgtacagcaacacactggccggtgtgtgggtgaccacgggcagcacccct
gtgctccgcagaaacagaatacacagcggaaaacaggtgggcgtttatttctatgataat
ggtcacggtgtgcttgaagacaatgacatctataaccacatgtactctggagttcagatc
agaactggcagcaatcccaaaattaggaggaataaaatctggggtggacaaaatggagga
attcttgtttacaattcaggtttaggctttatcgaagacaacgagatctttgacaacgcc
atggcaggggtttggatcaagaccgacagcaaccccacactccgcaggaacaagatccac
gacgggcgggacgggggaatctgtatattcaacggaggacgagggttgttggaagagaac
gacatcttcaggaacgcccaggcgggagtcctcatcagcacgaacagtcaccctgtgctg
cgcaagaacaggatatttgatggatttgctgctggtattgagatcacaaatcacgcaacg
gcaacgttagaaggcaaccagattttcaacaatcgcttcggtggactgtttctcgcatct
ggcgtcaacgtcacaatgaaagacaacaaaatcatgaacaaccaggatgccattgagaaa
gctgtgagcagaggtcagtgcctgtacaagatttccagttacaccagctatccaatgcac
gatttttacaggtgtcacacctgtaacacgacagaccgcaacgccatctgtgtgaactgc
atcaagaagtgtcatcaagggcacgacgtagaatttattagacatgataggtttttctgt
gactgtggtgcggggacgttgtcaaacccttgcacactagccggagagccgactcacgac
acggacacgctgtacgattcggctcctcctatagagtccaacacactgcagcacaactga
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