Pimephales promelas (fathead minnow): 120469459 Help Entry 120469459         CDS       T08155                                  Symbol focad Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pprm03019]     120469459 (focad) Messenger RNA biogenesis [BR:pprm03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      120469459 (focad) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Focadhesin DUF3730 HEAT Motif Other DBs NCBI-GeneID:  120469459 NCBI-ProteinID:  XP_039514392 LinkDB All DBs Position Unknown AA seq 1807 aa AA seqDB search MTETLKTRFEFPSSLIQAQAVRTLVTAVLKEKGQNERICQTTTKGPALESLWEQCSSDST VVRSACCDALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDSGA SFTCPYSIRSFPHPYITVLENRPDCWPALLQEIDDFLQLATDKDEPVYVEMLVPFLRYLY CEPQRLAENALLRHSLLRVLLLPRGAPEPDSLQEKGASGTRVVRELIRSLFDLLPYMLVD SVTAVVEFSSFAESLTAALLTDPGFWRKELTQMALQLLCACQLSVHLRGELMSLLHTLHQ IIPAHAVELPPEQVIMGISLLLLSASTSQQTALLELAVKIVPPEVPPPFGASLLVMPLLQ VLSCSSLMEALTDTQTHLKNLKLANSLLQMVQREPSDWKEDSTQLSLPLSTWYSELQVST SVLKRISLDSMSSVEWLYSLQSSLPVCEHVPDTVCLLVSHVIVSSHGDVCRLALDTAAAI AEADPAKVPCLLPVLMFKLGRVSDPALSLSVLYTLPRLGTHKFCIPQVLHVLQTLGSSSR LRPVALRLLTLLWKKQDRVYPDLQRLMSQLEKSSVVIGKDTQWEQILARAACIRDICRER PYQHGGDMLAAVRDTLLQFSRKDQATPAALALQGLQELCRAEVVDISSTWKALSPKLCCD TRPLVLKATAELLALVPALTIKTEEYEKFRNEAVSVLWGYALSQDPVVASQGFKALSEYP EPSHTILHLPEQARPVPKQPDEDDEGKENGNEKDEDISVPGASYVKLICLTPQSILPALE TFLTAVVRQEMNQMPRGVYHSALSGGNLRSDQGKTVCGIPSFMLKTYEKNKQPGLKPGLA AGLLLCYDLPVQTDKDGRPISRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWR GFMSRAYHGALRGRKAELEMLQKQGKESPEELQYKQHYAWLWVRDQLTDVVKSATKDSPV VQGNSILALSGLAVVLTRYESNLPTQSESGCEVVPDTLPTVHWLSMVTDTLLSIVSNSRN PKGQVFPWFIHRSYSGENTASVIARSCAALGLACLVPVLVTSHKESIPTILDTLATGLPD SPTADESQAVQFHSGLALGMFLAWLNDERVSDISGQSVAELLKKHLERLEVCCFNPNLEY NAGCVLGVGLVLSSLSSSSQCERDRVHVSLTLDRLVQTLQDSSSMSRMLQEVLAYSVACV GVSAFSSGIIEASKAEESMNTLRSLTEESQQTPGFALALGLTVFGLSCFGHGKAVDIQPR LLAAWTKILLAEGCPTMQRLSALNGLIALVGSETALIQLKSDTEESSQQQGRLNEVIRAL TQIITFSGAIGLQSNGACLLGHLHLAQMCSSHSRTAVPQDFGYLPEKSVIRASVDFITEA GRKGPEVIAPHLVKTVLAALAPVGGSFQYPPVNWSAILSPLMRLGFGEEVQHQCLVLAAS QAQSSQSAALFLGIWLVPPLVHSLSLRTRAYLYECLSSWMKHVAEDKLQVYVDSLAVQQF ELDTRAQRLPLCLSILRGLSKAMAVPNPPQNCWTALCSTTEKIYNLLSDNIPAGEVELYE EMCLCLSELSDTEVDRIIKVTEANVEKTAFLLSYLTSKGRVPLLGLNDVISTVLRVGNKK QISWLLLQGLHQSRFASSPNTGVSKRMEWLLELMGHIRNVAYGSPSVKCVDVIEGTDFLL GVFAAAVASWADHCSPLLIGIRAQWFPWHQCSQAPELTHGLYVNPATTELAVSACLSAVP YSIKQLLNKEPWKAQSQKFIDWLFSITEAPKRSFSETALLTARAALMSLRSTVEFRKKGV WTRAYGW NT seq 5424 nt NT seq  +upstreamnt  +downstreamnt atgactgaaactttgaagacaaggtttgagttccccagctccctcattcaagctcaggct gtgaggacgctggtcactgcagtgttgaaagagaaaggccaaaatgaaaggatctgtcag actaccactaaagggccagcgctggagtctctgtgggagcagtgcagcagtgatagtact gtcgtccgctcggcctgctgtgacgctttagtgcttctcgtggaacagggacatgcagat ctgccgtatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg ctgatcaaagtggtcggaaggctgctgcagatccaggcaagtcagcgggatagcggagca agcttcacctgtccatattcaattaggagcttccctcatccctacatcacagtgctggaa aaccgtcccgactgctggcccgctctgctccaggaaattgatgacttcctccagctggct acagacaaagatgagccagtatatgtggaaatgctggtgccgttccttcgttacctgtac tgcgagccccagaggttggcagagaacgctctgctcagacacagcctcctcagggtcctg ctcctgccacgaggggctcctgagcctgacagcctgcaggagaagggggcgtccggcact agggtggtccgtgagctgattcgcagcctctttgacctgcttccgtacatgctggtggac agtgtaacagcagtggtggagttcagctcgtttgccgaatctctgacggcggctctgctc acggatccaggcttctggaggaaggaactgacccagatggctcttcagctcctgtgtgcc tgtcagctcagtgttcatctgaggggagagctgatgtctctgcttcacacactccatcag ataatacctgcacatgcagtggaactcccgcctgagcaagtgatcatgggaatctccctg ctactgctaagcgcctccacctctcagcaaactgccctcctcgagctcgctgtgaagatt gtcccacctgaggtgccgcctccgtttggtgcatctttgctggtaatgcccttgttacag gtgctgtcctgctccagcctcatggaagccctgacagacacgcaaacgcacttgaagaac cttaaactggccaattctctgttgcaaatggtccaaagagaaccctccgattggaaagag gactccactcagctgagtttgcccctcagcacttggtacagcgagcttcaagtgtccacc agcgtcctgaagcgaatttccctagactccatgtcttctgtggaatggctttactccctg cagtcttctctccctgtctgtgaacacgtcccagatacggtttgtcttctggtctcccat gttatcgtcagcagtcacggggatgtctgcaggttagcgttggacacagctgctgccatc gccgaggccgatcccgctaaggtgccatgtctacttcctgtcctgatgtttaaactgggc cgagtgtccgatccagctttgtctctctctgttctctatactctgccaagactgggaacc cacaagttctgtatcccgcaggtgcttcatgttctgcagactctgggtagttcatccaga ctgaggcctgtggctctgcggctcttaactctgttatggaaaaaacaggaccgtgtgtat cctgacctgcagagactgatgtcacagcttgagaaatcgtcagtggtcattggaaaagat acgcagtgggagcagatattggccagagcagcatgtatcagggacatctgcagagagagg ccgtaccagcacggaggagacatgctggccgccgtcagagacacactgctgcagttctcc aggaaggatcaggctacccccgctgctctggcactgcagggcttacaggagctctgtagg gctgaggtagttgatatcagctccacgtggaaggcactgtctcctaagctgtgctgtgac accagacccctggtcctgaaggccacagctgaacttctggcactagtgcctgctttaacc atcaaaacagaagaatatgagaaattcagaaatgaggcagtgagtgttttatggggctac gctctcagtcaggacccagtggttgcaagccaaggttttaaagccctctcggagtatcct gaaccatctcacaccatcctacacttaccagaacaggccaggcccgtaccaaagcagcct gatgaggacgacgaagggaaggaaaatgggaacgagaaggatgaagatatttcagtgcca ggggcgtcatacgtcaaactaatttgtctcacaccgcaatccattttaccagcccttgag accttcctaacagctgttgtgaggcaggagatgaaccaaatgccccgcggggtgtaccat tcagcgctgagcggggggaatctgcgctctgaccagggaaaaactgtctgtgggattcct tccttcatgctgaaaacatatgagaagaacaagcagccgggtcttaaacctggcttagca gctgggcttctactctgttatgaccttcctgttcagactgacaaagatggacgtccaatc agccgcttccttgtcagcagggggcggagttatcaacaaatgttagccacccttattcac gaggtgaacatccagccgtcggagtggcaccgctctctgcttttgcctcaggcctggcgg ggcttcatgagccgggcttaccatggagctctccggggtcgaaaggcagagctggagatg ctacagaaacagggtaaagagagtccagaggaactgcagtataaacagcactatgcctgg ctctgggtcagagaccaactgactgatgtggtcaaatctgccaccaaagatagtccggtc gttcagggtaactctattttagcactaagtggcctggctgtcgtcttaaccagatacgag agcaaccttcctacacagtctgagagtggatgtgaggtggttccagacacccttcccaca gttcattggctgtcgatggtgactgacacactgctcagcattgtgagcaatagcaggaac ccgaaaggtcaagtcttcccatggttcattcatcgctcatactccggtgagaacacagcg agtgtgatcgcgcgctcctgtgccgctctgggtctggcgtgtttggtgccggtgttggtg acctcacacaaagagagcattcccactatactggacactctagcgacgggactgccggac tcgcccaccgcagacgaatctcaggcagttcagtttcacagcggcctggctctgggcatg tttctagcatggctgaatgatgagagggtcagtgatatatctgggcagtcagtggcagag ctgctgaagaaacatctggaacgactggaagtttgttgcttcaatcccaatctggagtac aatgctggttgtgtattgggtgttggtttggtcctgagttctctcagtagcagtagtcag tgtgagcgggaccgtgtgcacgtgtctctgacactggacagactggtgcagacgctgcag gacagcagcagcatgagccgcatgttgcaggaggttttggcctattctgtggcgtgtgtc ggagtttcagcatttagctcaggcattatcgaggccagtaaagctgaggaaagcatgaac acgcttcgctccctgacggaggaaagccaacagacaccaggctttgctttggcgttgggt ctgacagtgtttggcctgtcttgttttggtcatggtaaagctgtggacatccagcctcgt ctgctggccgcctggaccaaaatactgctggctgagggttgtcccacaatgcagaggctg tccgccctcaatggactgatcgcattagtggggtctgagacggctctcattcagttgaag agtgacacggaggagtcctcacaacagcagggcagactgaacgaggtcatccgagccctt acacagatcatcaccttctcaggagcaataggtctgcagtctaacggggcatgtctgctg ggacacctgcatctggcccagatgtgcagcagccacagtcgaaccgcagttcctcaggac ttcggttatctcccagagaaaagtgtcatccgtgcgagtgtagacttcatcactgaagca ggaaggaaagggcctgaggtcatcgctccacacctagtgaagacggttctggcagcttta gccccggttggtggaagtttccagtatcctccagtcaactggagtgccatcctctctccg ctgatgagactcggctttggtgaggaggtgcagcatcagtgtttagtgttggctgccagt caggcccagtcctcccagagtgccgcactcttcctcggcatctggctggtgcctcccctg gttcacagcctcagtctccgcaccagggcttatctgtacgagtgcctgagctcctggatg aagcatgtggctgaggacaaactgcaggtgtatgtggacagtctggcagtgcagcagttt gagctcgacacgcgtgctcagcgcttgcccctgtgcctgtccatcctgcgtggcctgtcc aaagccatggcggtccccaacccgccccaaaactgctggaccgccctgtgctctaccact gagaagatctataacctcttatctgataatataccggctggtgaagtggaactctatgaa gagatgtgtttgtgtctgtctgaactgagcgacactgaggtagaccgcataatcaaagtc actgaggctaatgtggaaaaaacagctttcctcctatcctacctgacctccaaaggcaga gtccctctcctcgggctcaatgatgtcatcagtaccgtcctccgggtggggaataaaaaa caaataagctggcttcttctgcagggcctccaccaatcacggttcgcctctagtcccaat acaggggtctcgaaacgaatggagtggctgctggagttaatgggccacatcagaaacgtt gcttacggatctccctctgttaaatgtgtcgacgttatagagggcacagacttcctcctc ggtgtgtttgctgcagcagtggcgtcctgggcggaccattgctccccgcttctcattggc atcagagcccagtggtttccctggcatcagtgctctcaggctccagaactcacgcacggc ctgtatgtcaaccctgccaccactgagctggcagtgtccgcatgcctctctgcagtcccg tacagcatcaagcagctactcaacaaagagccgtggaaggcccagtcacagaagttcatc gactggctcttcagcatcactgaagctcctaagcggagtttctccgagactgccctactc acagccagagcggcattaatgtctctgagatccacggtggagttcaggaagaagggtgtg tggaccagggcgtacggctggtga

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