Pimephales promelas (fathead minnow): 120469534
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Entry
120469534 CDS
T08155
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120469534 (gigyf1a)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120469534 (gigyf1a)
Surveillance factors
Other surveillance factors
120469534 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
SPIN90_LRD
Motif
Other DBs
NCBI-GeneID:
120469534
NCBI-ProteinID:
XP_039514500
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVSSPPASPAMPKYKLAEYRYGREEMLALYVKDNKVPEEM
QDKEFATILQDEPQQPLALLALTEEEQRNFSMSVNSVAVLRLMGKGGGAAPAGVTRGRGT
VRGGRGRGRGEGGFYQRSGEEVEGGFGRSVREIHRSQSWDDRSERRFEKPLRRDGARLGF
EEAAPVGRKEFMRSDSDNWRTLREEQEEEEAAEAGGSWRITGSRREDGGPRSAGWREHTG
PGEPLRRRKFDFDFRDGGNEGGRRRAGSDGAEDERDGLPEWCTDEEDGEMGTFDSSGAFM
CIKKGPKDPIQEEEFEFQGLEDEEEDCANLEKNNGIGAVKNEKDVIDFAPVSETEVKAVS
PSPPPPSLPPSLPAPVPEALPSAAPSGLEEPQPVPSIPNKLPSEVLSEAMLDLSPSASSS
LPSSPPSSSSAATDLPLPGGDIEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESR
NTASALPLSHDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFAMNLLVKRGCDEGFQPL
GEVIKMWGRVPFAPGPSPPPLLVRNQAHLRPQPPRGAIGNMDQERLKKQQELAAASALYQ
QQQQLFQLINRCGEQGMMPSLNRSMSVPDTGSMWDMHTSASQPAGGEASLWDLMNSSTQG
PILEQLQKLHERREAELRAKREEEERKRRDEKRREEQKRREEEELYRRKQQQDLLMKLLQ
QAPRQGSSGSGSGWSGGPIPGLGKQTKPHNLLDIQPEAERMHKQQHRVQQQQRWSDSSSL
WGASGSLDGKVGGGGSPSGGGMGVWDEALKNQSAHRNNMGLKNSRSSPSLSEQYMMRSRK
RTEEEDRLFKLLQGMKSQDGFTTWCEQMLHALNTSANNSTSSQDVPTIVAYLKEVESPYE
VLNFICSYLGDTVEAKEFARQFLERRAKQKANHQRQQQQLSKEMAGLSMNNFPLQDTVRG
MNPSTLQSMFQAVHSGKGGAVYDQAAKLKKKQPMMLHSDPSILGYSFHGGPDRYGLNEME
MVEDY
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaactttggcccagaatggcttcgagcactttccagtggaggc
agtgtgtcttcccctcctgcctctcctgctatgccaaagtacaagttggccgagtaccgt
tacggccgagaggagatgctagcactttatgtcaaagacaacaaggtccctgaagaaatg
caggataaggagttcgctactattctgcaggatgagcctcaacagccactggcactgttg
gctctcactgaagaggagcagaggaatttctccatgtctgtcaacagtgtggctgtgctg
aggcttatgggtaaagggggcggagccgctccagctggggtgactcgaggtagaggcact
gtgcgaggtggtcgaggtcgaggaagaggagagggcggattctaccaaagaagcggtgag
gaagtagagggcgggtttggtcgtagcgttcgagaaatccatcgcagccagagctgggat
gacagaagtgagcggcgctttgagaaacctctgcggagggacggtgcgcgtttgggtttt
gaggaagcggctccagttggcaggaaggagttcatgcgctctgatagcgacaactggcgc
acactgagagaggagcaggaggaggaggaagcggcggaggctggcggcagctggagaatc
actggctcacgaagagaagacggtggtcctcgctcggctggttggcgggaacacactggt
ccaggtgaaccccttcgccgcaggaagttcgacttcgacttccgggatggagggaatgag
ggaggcagaaggagagccggcagcgatggagcagaagatgaacgagacggtctgccagag
tggtgcactgatgaggaagatggagaaatgggaacctttgattcttctggagcgtttatg
tgtattaagaagggtccgaaagaccccatccaagaagaggagtttgagttccaggggttg
gaggatgaggaagaggactgtgctaatctagagaagaataacggcatcggtgctgtaaaa
aacgagaaagatgtcattgacttcgctccagtgtctgaaactgaagtgaaagcggtttct
ccttctcctcctcctccttctctccctccctctcttcctgctcctgtccctgaggctttg
ccctctgctgccccctctggtctggaggagcctcagcctgtcccctccattcccaacaaa
ttaccaagtgaagtgttatcagaggccatgttagatttgagccccagtgcctcctccagt
ctgccttcatcgcctccctcttcgtcctctgctgctactgacctcccactgccggggggt
gatattgaggatgacgagggcatgaagcacctgcaacaggaggcagagaagatggtggca
gcgctgcaggatacatctctagaggaagagtgtttcacccagactcttcaggagagcaga
aacacagcctctgctcttcctctctcccatgactctgccatgaaatggttttacaaagac
ccgcaaggagagattcagggtccgttcagtacagtggaaatgtgtgagtggtttcaggcg
gggtatttcgccatgaacctgcttgttaaacgtggctgtgatgagggatttcagccgctg
ggggaagtcattaagatgtgggggcgtgtgccttttgcccctggcccctcccctccgccc
ctcctggtgaggaatcaagcccatcttcgccctcaaccaccccggggggcaatcggtaat
atggatcaggagcggctgaagaagcagcaggaattagcagctgcctcggctctttaccag
cagcaacagcagctctttcagctcatcaacaggtgtggagagcagggtatgatgccttcg
ttaaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcc
tcacagccagcaggcggtgaggccagtctatgggacttaatgaattcttcaactcagggt
ccaattctagaacagcttcagaagctacatgagagaagagaagctgaactcagggccaag
cgtgaggaagaggaaaggaaacggagggatgaaaaaaggcgagaagagcagaaaaggaga
gaggaggaggagctttataggcgcaagcagcagcaggatttgctgatgaagttgctccag
caggctccgcgtcagggttcctcgggctccgggtcgggctggagcggaggacccatccct
gggctgggaaagcagaccaaaccccacaacctcctggacatccagccggaggcggagaga
atgcacaaacagcagcatagagtccagcaacagcagaggtggagtgattcctcttcgctg
tggggagcgtctgggtctttggatggaaaggtgggtggtggtggaagcccctcgggagga
gggatgggcgtttgggacgaggccctcaagaaccagagcgctcatcgcaacaatatgggg
ctgaagaacagccgcagcagtccctcactgagcgagcagtacatgatgaggagccgtaaa
cgcactgaggaggaggatcggctgtttaagctcctgcaggggatgaagtctcaggacggc
ttcaccacctggtgtgaacagatgctgcatgcgctcaacacctccgccaataactccacc
tcttcccaggatgtgcccaccattgtggcgtacctgaaggaggtggagtctccgtatgag
gtgttgaactttatctgctcctatctgggcgacactgtcgaagccaaagagttcgccaga
cagttcctggagcgccgtgccaaacagaaagctaaccaccagagacagcagcagcagctc
tccaaagagatggctggactcagcatgaacaacttcccactgcaggatactgtacgagga
atgaaccccagcactctgcagtctatgttccaggcagtgcattctgggaagggtggtgcg
gtctatgatcaggcagcaaagctgaagaagaaacagcccatgatgctgcactctgaccca
agcatcttagggtactcattccatggtggccctgatcggtatggtctaaacgagatggag
atggtcgaggattactga
DBGET
integrated database retrieval system
