Pimephales promelas (fathead minnow): 120469680
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Entry
120469680 CDS
T08155
Symbol
rtn3
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120469680 (rtn3)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120469680 (rtn3)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120469680 (rtn3)
Autophagy
ER-phagy
ER-phagy recepters
120469680 (rtn3)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120469680 (rtn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
120469680
NCBI-ProteinID:
XP_039514749
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MADPMTQSSQISSSQGLNDGHSATAKDSKFSDSFFSSPVSLIQSPQDKRVVLGSDKPSEN
SATSLHFSPKSSSFSPVACGIESSGSADDNIDRTFKEKRELFDSSFGSQKQDSPIKTSPV
SERIKALEALAAKKNDFDGGFPNFKERHYEKSPTELHGISSRSSFQKRTMSSEQESPESP
FEVLGEARHGTDFEDTADWMRAHLPPAPDFNIEDPVLDEENESPMVQESPSKVIKANNVD
AGEVPEPFAGVPDQFMDSPIKVADDIDQSKEDVNKQSKQESVEEDSEFDLNFLPTAYMWD
KQEKADTGTQDCQIFPDNQELPSCPAPPADFESPLPPVSQHIEPSSTQYSNISKANLEPA
EVQEVDSSGESDDTVIEEAMSIPIMGNNDLDTKTHKEEETIPNNKKPPIQVPIINVIETE
EQVLSDEEEEQFEVEGDEDEDDGEKGQILQGEGRGSPEQHHSEVSERASVETPHEEHKPD
HDISSQANQTDSDAEHSPEHQVIDDDYESGIFLQSSPDSGGLNFEDSQEKSHMSQNLVSF
EPFKESTLDKELDKTAEILSDLPPDISCPSNELSDVETYLDHYASEELALKDQLNLSCFK
ESKGEKTELSKSDYRTDNENISAPVQESFDNIIDDFDETPNECKLDYESMPEPSLFETSS
DIHDDIETILCQNKMPSVDSEDKKSTVEIKTSNLQELEGLPVQSIDRQTPVQEIPPAPFP
SFHNEQSSKINDVISEPTTSEVAVITKSETQVVTPKDLLDRPDSPETMSDTETFEAECSV
TAATDSFVDFMRECLKSRQDEEPEGFSSGHQTIDQNPKSDSPPSTQSSPAMIMDLEQERL
TISALKELGSSQEEEDENIPTMKTVLKPDKAPIPTPNPEASIISSSQSLPNECQAVLPKE
VEAIDIWVAEAYHLAEHVLTAILTHFSVNDLVHWRDPKKSGVVFGVSLLLLLSLAAFSVI
SVISYLLLALLCVTISFRIYKSVIQAVQKSNDGHPFKALMEKDVAVPPETFRKHVDACLT
HVNRALKQMSRLFLVEDLVDSLKLAVVMWLLTYVGAVFNGITILILADILLFSVPLIYEK
NKTQIDHYIDIVRTQVNTTMAKLQEKLPGAMKRCKAE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaatgacccaatcttctcagatttcgtcgtcacaaggcctgaacgatgga
cattctgcaacggccaaagactcaaagttttccgattcctttttttcttcgcctgtatct
ctcattcagtctcctcaagacaaaagagttgtactaggctctgacaagccttcagaaaat
tcggctacctctcttcacttttctcctaagtcaagttccttttctccagttgcttgtgga
attgaatcttcaggatcagctgatgacaacatagatcgtaccttcaaagagaaacgagag
ctttttgattcatcttttggctctcaaaagcaggactcacctataaaaacttcgccagta
tctgagagaatcaaagctttagaagctttagctgcaaagaagaatgattttgatgggggg
tttccaaattttaaagaacgtcactatgagaaatcccccacagaattgcatggaatttcc
tcccgttcgtcctttcagaaaaggacaatgtcaagtgaacaggaatctcctgaatcaccc
ttcgaagtgcttggtgaggcaaggcatgggactgactttgaggacacagcggactggatg
agagctcacttacctcctgcaccagatttcaacattgaagatccagttcttgatgaggaa
aatgagtcccccatggtgcaagagagcccatccaaagtgatcaaagcaaacaatgttgat
gcaggtgaagttccagaacctttcgcaggagttcctgatcagtttatggacagccctatc
aaagttgcagatgacattgatcaatcaaaggaggatgtcaacaagcaatcaaaacaagag
agtgtagaggaagattctgagtttgacctgaactttttaccaacagcctatatgtgggac
aagcaagagaaagctgatacaggcactcaagactgtcagatattcccagacaatcaagag
cttccttcctgtcctgctccccctgcagacttcgagtctccattaccccctgtgtcccaa
catatcgaacctagttctacacagtattccaacatttcgaaagcaaatttggagcctgct
gaagtccaggaggtagacagctctggggagtcggatgatacagtaattgaggaagccatg
agcatcccaataatgggaaacaatgacctagacaccaaaacccacaaggaagaggagacc
attccaaacaacaagaaaccgccaattcaggtacctattattaatgttattgaaactgag
gaacaagtgctaagtgatgaggaagaagaacagtttgaggtagaaggtgatgaggatgag
gatgatggtgaaaagggtcagattttgcaaggtgagggcagagggtcaccagagcaacac
cactcagaagtttcagaacgtgcatctgtggaaactccacatgaagaacataaacctgac
catgacatttcctcacaggcaaatcaaactgactctgatgctgagcactctcctgaacac
caggttattgacgatgattatgaaagtggcattttcctccagtcctccccagactcagga
ggcctgaatttcgaggactctcaagagaagtcgcatatgtctcagaatttagtgtctttt
gaaccctttaaagagtctacccttgataaagagcttgacaagactgcagaaatactttct
gaccttccaccagacatcagctgcccctcaaatgagctcagtgatgtagagacatacctg
gatcattacgccagtgaagagcttgctttaaaagaccagctgaatttgtcttgttttaag
gagagcaaaggtgagaaaacagagctttcaaagtcagactaccgtactgataatgaaaat
atcagtgcccctgttcaagaatcctttgataacatcattgatgatttcgatgagacgccc
aacgaatgcaagctagattatgaatctatgcctgagccttccctttttgaaacttcatct
gacattcatgatgacattgagactatactctgccaaaacaaaatgccaagtgttgattca
gaagataaaaagtcaacagtggaaatcaagacgtctaacttgcaggaactggaagggttg
ccagtgcagtccattgaccgacaaaccccagttcaagagatcccacctgcaccattcccc
tctttccacaatgagcagtctagtaaaatcaatgacgttatttctgagcctacgacaagt
gaggttgctgtgataacgaagtctgaaactcaagttgtgacccccaaagatcttttagat
agaccggattcgccagagaccatgagtgatacggagacgtttgaagcagaatgctcagta
acggcagctactgacagctttgtggatttcatgagggagtgtcttaaatcacgacaggat
gaggaacctgaggggttcagttctggacaccaaactatagaccagaatcccaaatctgat
tctcctccttccactcaatcatccccagcaatgatcatggacttggagcaggagcgcctc
acgatttctgctttgaaagagctcgggagcagccaagaggaggaagacgagaatattccc
acaatgaagactgtcctaaagcctgataaagctcctattcctacaccaaatcctgaggct
tcaatcatctcatcttctcaatctcttccaaatgagtgtcaggcagtacttcccaaagag
gtagaggcaatcgacatttgggttgcagaggcctaccatcttgcagagcatgtcttgaca
gcaatactaacccacttttcagtgaatgacctggtgcactggcgggaccctaagaagtcc
ggcgtggtgtttggcgtgtcgctgctgttgctgctgtctctggcagcgtttagcgtgatc
agcgtgatctcatacctgctgctggctctgctctgcgtcaccatctctttccgcatctac
aagtccgtcatccaggctgtgcagaagtccaacgatggacaccctttcaaagctctgatg
gagaaagatgtcgccgtgccacccgagaccttccgcaagcacgtggacgcctgtctcaca
cacgtcaaccgtgcgctcaagcagatgagccgcctctttctggtcgaggatctggtggat
tccctcaagctggcagtggttatgtggctgctgacatatgttggagcggtcttcaatggc
atcaccatcctcatcctcgctgacatcctgctcttcagtgtaccgctcatctatgagaaa
aacaagacccagattgaccattacatcgacattgtacgcactcaagtcaacaccacaatg
gccaagctacaagagaaactcccaggagccatgaagcgctgtaaagcagaatga
DBGET
integrated database retrieval system
