Pimephales promelas (fathead minnow): 120469730
Help
Entry
120469730 CDS
T08155
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120469730 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120469730 (ungb)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
120469730 (ungb)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120469730 (ungb)
Prokaryotic type
120469730 (ungb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
120469730
NCBI-ProteinID:
XP_039514821
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MSKASCRKQVSGENMQLSEEQLHQIEQNRRAALERLARRNVPVPVGESWRRQIGTEFAKP
YFTKLMSFVTMERKCFTVYPSPEQVFYWTTLSAIEDVKVVILGQDPYHHPGQAHGLGFSV
LRPKPPPPSLENIFKELTEDIIGFQHPGHGDLTEWAKQGVLLLNSVLTVRAQQPCSHEGQ
GWELFTDAVVLWLSRNLNGLVFLLWGLHAQRKGRVIDRKSHHVLETSHPSPYSAHFGFFG
CRHFSKTNLLLKATGKSPIDWTAL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagcatcctgcagaaagcaagttagtggcgagaacatgcagctgagtgaggag
cagctgcatcagatagagcaaaacagacgcgccgcactggaacgactggccagacgaaat
gtacctgtacctgttggtgaaagctggcgaagacaaattgggactgaatttgcaaaacct
tattttacgaaactaatgtcttttgttacaatggagaggaaatgctttactgtctatccc
agccctgagcaggtgttttactggacaactttgtctgcaattgaagatgtaaaagtggta
attcttgggcaagatccctatcaccatccaggtcaagctcatggtttgggcttcagtgtg
ctcaggcctaaacctcctcctccaagtttagaaaacatatttaaggagctgacagaagat
attattggtttccagcacccaggtcatggagatctcacagaatgggctaaacagggtgtt
ctgctgctgaattcagtgttgacagtgagggctcaacaaccctgctctcatgagggtcaa
ggctgggagctcttcacagatgctgtggtcctttggctcagcaggaacctcaatggcctg
gtctttctgctttggggcttgcatgctcaaagaaaaggcagagtgattgacagaaaaagc
catcatgtccttgagacttcacatccatcaccatactcggcacatttcggcttctttgga
tgtaggcacttttctaaaactaacttgctacttaaagcaacaggaaagagtccgattgat
tggacagctctctaa
DBGET
integrated database retrieval system
