Pimephales promelas (fathead minnow): 120469790
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Entry
120469790 CDS
T08155
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120469790 (cacna1ba)
04020 Calcium signaling pathway
120469790 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120469790 (cacna1ba)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120469790 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
120469790
NCBI-ProteinID:
XP_039514888
LinkDB
All DBs
Position
Unknown
AA seq
2357 aa
AA seq
DB search
MARFEDDLPTRYGGGGGSPAGPVRGASRQPGPPTGPRVYKQTMAQRARTMAIYNPIPVKQ
NCLTVNRSLFIFSEDNIIRKYAKKITEWPPFEYLILATIIANCIVLGLEQHLPALDKTPM
SKRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDF
DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYM
GKFHRTCFRIDNGEQAADFPCGLEEPARTCENGTECREYWTGPNFGITNFDNILFAVLTV
FQCITMEGWVDILYNANDASGNFWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE
KRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDSAWYKRKCNNPVLKI
AKKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNDSSSYFRRKEKRFRFFIRR
MVKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAINKKLALQKAKEVKEVSPISAANISITAFIRPIPGALSCSSSNSSSHSP
KEQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEDLNARLNSNLHLRPDIKTHLDRPLVV
EPQCDGRISPNRGWGKPQNLQGEGGMPEERIPPGMEPPQSHAPRKHHRHRERPSNETNEN
GDTGHGKEGRHHVHHSRSKEHDGTRCKEGKGEGGRRHHHQSSVDEGVGGGEREHRHHHSH
RHNREGNGVVSAGGKSERRSRQKEGSRSGTREGERCSRGENGGNGGRRRHRPRTSKAQST
LEAEEQQENGEKEEGKSASHRHMDMGGDSLAINPHQPSVGNRWCLEKPEDSNKRNIGQTG
GMGTHIPVTITSPPGETTLIPMNSIDSETMPMTEKNLENLNQSSTRPILPFSSMFIFSPN
NPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTF
EMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFTFSSFMGSHQSVNRGTKGKDIN
TIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFK
GKFFYCTDESKCLEKDCRGVFLDYDKDDVTAQPREWKKYEFHYDNVLWAFLTLFTVSTGE
GWPTVLKHSVDATFEDLGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDK
ALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIALNT
VVLMMKFHGANDAYEAMLKYLNIVFTALFSMECVLKIIAFGPLNYLKDAWNVFDFVTVLG
SITDILVSEIKTTDRLLNFSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLL
IAMLFFIYAIIGMQVFGNIDLNDDTAINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCL
SERTCDEKSGTLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPIA
DDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWPNLSQKTMDLLVTPH
KPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQQKEQAGHGSQNKVSALLEPILPLTHI
QDQAMNSVDLASEFKAQTIPDPAPPRSTTLNNGRTHHDNPMKGSSSWASEKSKEVQRSKR
RPMSRGQSEEASNANTAQESVEMKKMENSANTATSGGLEGQGRAVSMPKLNAEMQRSHSR
HSPGTLLEPIPDSPMRRSASTFAPQRPQEVNMKDYTLEKPVQERHHHHHHHHRCHHRRER
DKKQRSLDRSPTGQHKATDTTADPVEERAHDRGRSHERKHHSSSAEKQRYYSCDRYGSRE
HCPSKCAVASCATSPSEAEEGNLNKQGSGWAKGSPVLLTSGASTPSRGRRQLPQVPLTPR
PSVAYRTANSSPVHFLGTQAGLLPPSPGRLSRGLSEHNGLLYSGSISSSPAPVSRINSEP
FLGPPDHPAGLQPDTYAVFQEDPSPQTGRSAQIVAIPPPPQQQFRGVPNGYHFTTGPGTS
RGRARQYYPMAEVDDWC
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagatgatctcccgacccggtatggaggtggtggtggctctccagcg
ggtccagtcagaggggccagccggcagccaggccccccgaccggaccgagggtctataag
caaacaatggcccaaagagcccggacaatggccatatacaacccaataccggtcaaacag
aactgcttaacagtcaacagatcccttttcatcttcagcgaagataatatcattcggaaa
tatgcaaagaaaataacagagtggcctccatttgagtacttgattctcgccaccatcata
gcaaactgcattgtactgggcttagagcagcatttaccagctttagacaagacacccatg
tcaaagcggctggatgacactgaaccttacttcatcggaatattttgcttcgaggccggg
atcaagattatcgctctaggctttgcttttcataaaggctcctacctccgcaatgggtgg
aatgttatggattttgttgtcgtgttgacggggattctgaccatagtggggccagacttt
gacttacgaacactcagggcagtgagagtcttgcggccgctcaaactggtgtctggaatt
ccaagtctccaagtggttctgaagtccatcatgaaagcgatggttcctctgcttcagatt
ggccttctgctcttctttgctattctcatgtttgccatcattggtctagacttctacatg
ggcaagttccaccgcacctgcttcagaatcgataacggggaacaggcggctgactttcca
tgtgggttagaagaaccagcccggacgtgtgaaaacgggactgaatgtagggaatactgg
accggtccaaactttggcataacgaactttgacaacatcctgtttgctgtgctcaccgtc
tttcagtgcatcactatggaaggatgggtggatatcctttacaatgccaacgatgcttca
gggaacttctggaactggctctacttcatcccactcatcatcattggctctttcttcatg
ctcaacttggttctgggggtgctgtcaggggagtttgcaaaggagcgagagcgtgtggag
aaaaggcaggagttcctgaagctccgcagacaacagcagatagagagggaactgaccggt
tacttggagtggatctgcaaggcagaggaagtcatgcttgctgaagaagataaaaatgca
gaagagaaggaggatagtgcctggtacaagaggaaatgcaacaacccagtgttgaaaata
gccaagaagagcaaaaatgacctcattaatgcagaagaaggagaggaccacttcactgac
atctcatcggttgctccccaaggctctccatttacccgtacaagtgtgaagagcagcaag
aatgatagctcttcgtactttcgcagaaaagagaagaggtttcgcttcttcatccgacgt
atggtgaaggcccagagcttctactggaccgttctgtgtatagtgggactgaacacactg
tgtgtggctatagtccattacgaccagcccgactggctcacatatgcactgtatttggcg
gagtttgtgttccttggtctgtttctaatagagatgagtctgaagatgtatggcctcggg
cccaggacctactttcactcctcatttaactgctttgactttggggtcattgtgggtagc
attttcgaggtgatctgggctgctgttaaaccaggagcctcttttggcattagtgtgttg
cgagcactgcgtttgctgaggatattcaaggttaccaagtattggaactctttgcgtaat
ctggtggtgtctctactcaactcaatgaagtccatcatcagtctcctgttcctgctgttc
ctcttcatcgtggtgtttgctttgttggggatgcagctctttggaggacagtttaatttt
gaagatgagaccccgactaccaactttgacacattcccagctgcaatccttacagtgttt
cagattctgacaggagaggattggaatgcagtgatgtatcatggtatcgaatcccaggga
ggagtgcaccggggaatgttctgctctgtgtacttcattgtgctcacactgtttggaaac
tacacgctcctaaatgtatttttggccattgctgttgataaccttgccaatgcacaagaa
ctcaccaaggatgaggaggagcaagaggaagccatcaataagaaactggctctgcagaaa
gccaaggaggtaaaggaggtcagccccatttcggccgctaacatttccatcacagctttt
ataaggccaattcccggtgctctttcatgcagctcctccaactccagctctcattcacct
aaagaacagcaacggtctctaaagatgatgtcggtgtgggagcagcgcaccactcagatt
cggaagcacatgctggccagcagcgaggcattgtaccaagaggatctcaacgccaggctg
aattccaacctccacctccgccctgacatcaaaacccacctggaccggcctctggtggtg
gaacctcaatgcgacggccgcattagccctaaccgaggctggggcaaaccccagaatttg
caaggggagggtggcatgccggaggaacgaatcccccctgggatggagcccccacagtcg
catgcaccacgcaaacaccaccgtcacagggagcgtccctccaatgagaccaatgaaaat
ggtgacaccgggcatggcaaagaagggcggcatcacgtccatcacagccgcagtaaggag
catgatgggacacggtgtaaagaggggaagggcgaggggggccgcagacatcaccaccag
agttcagtggatgagggagtgggaggtggggagagagaacaccgtcaccatcactcccac
aggcataacagggagggcaatggggttgtcagtgctgggggaaagagtgaacgacggtcc
aggcagaaggaaggctcacgatcaggaactagagagggagagaggtgctccaggggggaa
aacggtggtaatggagggcggaggcggcacaggccgcgaaccagtaaagctcagtccaca
ctggaagcagaggagcaacaagagaatggagagaaggaggagggcaagtctgccagtcac
aggcacatggacatgggaggagattcattggctataaatccccatcagccttcagttggg
aaccgatggtgtcttgagaaaccagaagactcgaacaaacgaaatattggtcagactgga
ggaatgggcacacacatacctgtgaccatcacatctcccccaggagaaacgacccttatt
cccatgaacagtatagacagcgagacgatgcccatgactgagaagaatctggagaatcta
aaccagagcagcactcgtcccatcctccctttcagctccatgttcatcttcagcccaaac
aatccggtgaggcgtctgtgccattacattgtgagtctgcgctactttgagatgtgtatc
ctggtggtcattgccatgagcagtatagccttggctgcggaagacccagtccaagccaat
gctcctcggaacaatgtcctaaagtatttggactatgtcttcactggtgttttcacattt
gagatggtcattaagatggtggatttgggtttattgctgcatcctggttcctacttcaga
gatctgtggaatattctggactttattgtggtcagtggtgcactggtggcattcacattc
tcgagcttcatgggatcacatcaaagcgttaacagaggaaccaagggcaaagacatcaac
acgataaagtccctaagggtgttgcgagtcttgcgacctctgaagaccattaaacgtcta
ccaaaactcaaggccgtgttcgactgtgtggtgaactccctgaagaacgtgttgaatatc
ctcattgtctacatcctgttcatgttcatcttcgctgtcattgctgtgcagctcttcaag
ggcaagtttttctactgcacagatgagtccaagtgcctggagaaagactgcagaggggtg
tttctggattatgataaggatgacgtgacggcccagcctagggagtggaagaaatatgag
ttccactacgacaatgtgctgtgggcgtttctcactcttttcaccgtttctactggagag
gggtggcccacggttttaaagcactctgtagacgccacttttgaggatctgggtcccagt
ccaggctaccgcattgagatgtccattttctacgtggtctactttgtagtcttccccttc
ttctttgtcaacatttttgtggccttgataatcatcacattccaggaacagggtgataag
gccttgtcagagtgcagtctggagaaaaatgagagagcctgcatcgactttgctatcaat
gccaaaccgttgacccgatatatgccacagaaccagcagtcatttcagtaccgcttgtgg
aagtttgtggtctctccaccatttgagtactccatcatgatcatgattgctctcaacact
gtggtgctcatgatgaagttccatggggcgaatgatgcttacgaagcaatgctcaagtat
ctcaacattgtcttcactgctctcttttcaatggagtgtgttctcaagattattgctttc
ggccccttgaattacctgaaagacgcctggaatgtgtttgactttgtgactgtgctgggc
agcatcactgacatcttagtctctgagattaagacaacggaccgtctgctgaatttcagt
ttcctgagactcttcagagcagccagactaatcaagctcctccggcagggatacaccatt
cgcatcctgctctggacattcgtccaatcctttaaggcactgccttatgtatgccttctg
atcgccatgctttttttcatctacgccatcattggaatgcaggtgtttgggaacattgat
ttgaatgatgatactgccatcaatcgtcacaacaactttcggactttcctccaagcactt
atgctgttgttcaggagcgccactggcgaagcctggcacgagatcatgctgtcttgtctg
agtgagcgcacctgtgacgaaaaatcgggcacacttggaaaggagtgcgggagtgacttt
gcctacttctactttgtctccttcattttcctctgctccttcctgatgctgaacctgttt
gtggctgtcattatggacaactttgaatatctgacgcgtgactcctccatcctgggccct
caccacctggatgagtttattcgagtgtgggcggagtatgacccagccgcatgtggccgt
atcaagtacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttggga
aagaaatgccctccacgaatcgcctacaagcggctggtgaaaatgaacatgcccattgca
gatgacaacagtgtgcacttcacctctaccctgatggctctcatccgcactgctctggag
atcaaactggcatcaggcatggtggcccaacgtctgtcagatgctgaactgaagaaggag
ctctctacagtctggccaaacctgtctcagaagactatggacctgctggtcactccacac
aaacccaatgagcttacagtggggaaggtgtatgcggctcttatgatctttgactattac
aagcagaacagagccaaaagacttcagatgcagcaacagcagcagaaggaacaggcagga
catggatctcagaataaagtcagtgctctcttagagcccattcttcctctaactcacatt
caagatcaggccatgaacagtgtagatttggcctcagagttcaaagctcagaccatacca
gacccagctccaccacgctccaccacgctcaataacggacgcacacatcatgataaccct
atgaaaggatcttcatcctgggcctcagagaagtccaaggaggtccaacggtctaaacga
cgaccaatgtccagaggtcaatcagaggaagcctcaaatgcaaacactgcccaggagtca
gtagaaatgaagaagatggagaacagtgccaacaccgcaacctctggcggccttgagggc
caaggacgtgcggtatccatgccaaaactcaacgcagagatgcagaggagtcattcccgc
cattctcctgggactttactggaacccattcccgactccccaatgagacgctctgcatcc
acttttgcaccgcagcgccctcaggaggtgaatatgaaggactacactttggagaaacct
gttcaagaacgacatcatcaccatcaccatcatcatcggtgccatcatcgcagggaaaga
gacaagaaacagagatctctcgacaggtcgcctactggccagcacaaagctacggacaca
acagctgaccccgtagaggagagggcacatgaccggggtcgttcccacgagaggaaacac
cattcgtcttcggcagaaaagcagcggtattactcatgtgatcgctatggcagtcgggaa
cactgtcccagcaagtgtgccgtggcaagctgtgccacctcgcccagtgaggccgaggag
ggcaatctcaacaagcagggcagtgggtgggctaaggggagcccggtgttgttgacctca
ggggcgagcactccaagccgtgggcgcagacagctgccccaggtcccccttactcctcgt
ccctccgtggcctacaggactgccaactcttcccccgtgcactttctgggcacacaggcc
ggcttgcttccccctagtcccggcaggctgagccgcggtctgtccgagcacaacggccta
ttatacagcggctccatctccagctcgccggcccccgtcagtcgcattaactcagaaccc
ttcttgggccccccggaccaccctgccggcctccagcccgatacctacgctgtcttccaa
gaggatccgagccctcagacgggccgttctgcccagatcgtggcgattcccccacctccc
caacagcagttccgcggggttcccaacggataccacttcaccacgggccccggaactagc
agaggacgagcgcggcagtactacccaatggcagaggtggacgactggtgctag
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integrated database retrieval system
