Pimephales promelas (fathead minnow): 120469908
Help
Entry
120469908 CDS
T08155
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04141
Protein processing in endoplasmic reticulum
pprm04210
Apoptosis
pprm04217
Necroptosis
pprm04218
Cellular senescence
pprm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120469908 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120469908 (capn1)
04217 Necroptosis
120469908 (capn1)
04218 Cellular senescence
120469908 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120469908 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120469908 (capn1)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120469908 (capn1)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C2: calpain family
120469908 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
LPD26
Motif
Other DBs
NCBI-GeneID:
120469908
NCBI-ProteinID:
XP_039515127
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MIIVHTRKCPANQDTSEAGRNMEPIYATGMAAKLRSQWDRDAGLGQNHNAVKFLGQDYES
LRAQCQRAGTLFEDPLFPACSSSVGFNELGPRSSKTQGLRWKRPTEICMRPRFIVDGATR
TDICQGALGDCWLLAAIASLTLNDTLLHRVVPHGQDFDGSYAGIFHFQFWQFGEWLDVVI
DDRLPVKDGKLLFVHSAEGGEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEM
YELNKAPADLFSIIGRAVERGSLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGVEEVVY
RGNMTKLVRIRNPWGEVEWTGAWSDNSREWDNVDHSVRGRLQNRSEDGEFWMSFSDFLRE
FSRLEICNLTPDALQAGQVKKWSTSLYQGEWRRGSTAGGCRNFPATFWINPQFKVALKHP
DSPGQSDCSFLVALMQKDRRKKRREGKDMETIGFAIYEVPNEYLGRSAVHLKRDFFLSHA
SSARSELFINLREVSSRFRLPAGEYIIVPSTFEPNKEGDFVLRVFSEKPANSEEMDDKVT
ADIPEEQHLQESQIDAGFKSLFRQLAGPDMEISVTELQTILNRIISKHKDLKTDGFGKES
CRSMINLMDADGSGKLGLTEFHVLWEKIKRYLQIFRDHDLDKSGTMSSYEMRRALEAAGF
KLNNHLFQLIILRYTEQDLSVDFDNFVTCLVRLETMFKTFKTMDTDADGVVSLTFFEWIS
LTMFA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgataattgttcatacacggaagtgtcctgcgaatcaagacacgagtgaagcgggccga
aacatggagcccatttacgccacgggaatggctgcgaagctgcggagtcagtgggaccgg
gatgcaggattgggtcagaaccacaacgccgtgaagttcctgggacaagattacgagtcg
ctgagggcccagtgccagcgcgcggggaccctgtttgaagaccctctgttcccagcctgc
agctcttctgtgggcttcaacgagctgggcccgcgctcctccaagacgcagggattacgc
tggaagaggccgacggagatttgcatgcgtccccggttcattgtggatggagcgacgcgc
acggacatctgtcagggagctctaggtgactgctggctgctggcggccatcgcgtctctg
accctgaacgatactctcctgcaccgcgtggtgccgcacgggcaggacttcgacgggagc
tatgcgggaatcttccacttccagttctggcagttcggcgagtggctggacgtggtgatt
gatgaccggctgccggtgaaggatgggaagctgttgttcgtccactcggcggagggtgga
gagttctggagcgctctgctggagaaggcctacgccaagctgaacggctgttacgaggct
ctgtcgggcggcagcacgtccgagggcttcgaggacttcacgggcggggtcacggagatg
tacgagctgaataaagcgcccgctgacctcttcagcatcatcggccgggccgtggagaga
ggctcgctgctgggctgctcgatcgacatcaccagtaagttcgacatggaggcggtgacc
tttaagaagctggtcaaaggtcacgcgtactcagtgactggagtggaagaggtggtctac
aggggaaacatgactaaactggtgcgcatcaggaacccatggggggaggtggagtggacg
ggggcctggagtgacaactctcgggaatgggacaatgtggaccactccgtccggggccga
ttacagaaccgcagcgaggacggagagttctggatgtcgttcagtgatttcctgcgtgag
ttcagccgtttggagatctgtaacctgacgccggacgctctccaggcgggtcaggtgaag
aagtggagcacgtcgctctatcagggcgagtggaggagaggcagcacggctggcggctgc
aggaacttcccagccacgttctggatcaaccctcagttcaaggtggccttaaaacatccg
gattctcctggccaatcagattgcagcttcctggtggcgctgatgcagaaggaccgcagg
aagaagcggagagaaggaaaggacatggagaccatcgggttcgccatttacgaggtgcca
aatgagtatttgggtaggtcggctgtgcacctgaagcgggatttctttctcagtcacgcg
tccagcgctcgctctgagctcttcatcaacctgcgggaggtgagctcacgcttccgtctg
ccggccggcgagtacatcatcgtaccgtccaccttcgagcccaacaaagagggagacttc
gtgctcagagtgttctccgagaaaccagccaactcagaagaaatggatgataaagtcacg
gctgatattcccgaggagcaacatctgcaggagagtcagattgatgccgggtttaagagt
ctcttcagacagctggctggaccggacatggaaatcagtgtgacggagctgcagaccatc
ctgaaccgaatcatctccaaacataaagatttaaagacagacggcttcgggaaggagtcc
tgtcggagcatgatcaacctcatggatgcggacggcagcgggaagctcggactcacagag
tttcatgtgttgtgggaaaagattaaacgctacctgcaaatcttccgagaccacgacctg
gataaatcgggcaccatgagctcgtacgagatgaggagagccctggaagcggcagggttt
aagctgaacaaccatttattccagctgatcatcctgcgctacacggagcaagacctctct
gtggacttcgacaacttcgtcacctgtttagtgcgcctggagaccatgttcaagaccttc
aaaacgatggacacagacgcagacggggtcgtgtcgctcacgttcttcgagtggatctct
ctgaccatgtttgcctga
DBGET
integrated database retrieval system
