Pimephales promelas (fathead minnow): 120469993
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Entry
120469993 CDS
T08155
Symbol
si:ch211-168d1.3
Name
(RefSeq) ras and Rab interactor 3
KO
K17638
Ras and Rab interactor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120469993 (si:ch211-168d1.3)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120469993 (si:ch211-168d1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
120469993
NCBI-ProteinID:
XP_039515292
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MDSSLQRSLSVLDRLLLTHSIWLQLSINPDSAHQILQREIVGTFLVCKCSASHRKVLCVR
VQEGGVSQYPIREEDSTFSLESSALSFPDLCRLVAFYTISRDVLPFPLELPEAIIQATTH
TQLESISHLGLEFWSSQTSPGLPNGPPPPSAPHRTSRLISPCFVNPLFLQPPQPSRTASH
KRHRFKRSLRVRVSNETSLSLSGGESDLTQGETHGQIADQGGPRRTGGLSVLRRTPALTP
TSVEEDEQMLGQIPPSNSLPQRDNAELNKDTDNGEVCLALERTRAPSLAELDSNSSFSSL
EEEEAQDFAHQWPPAARGTRFPSANPTSTLRRMTAAFVCVFAPERRVARLVDELSHEKRS
TFGSLVQDFLEKQRQEMEASTYSSAVELLQGLRMFLSQAKNLLLEAGEIEPPIETLVPEN
EKDLALEKALFGCVLKPLKIQLHQTLVSLHTQDGSLRRITDSLLAYQEGALERLAVRVGV
LDVRGIDRAKAKLTLMQRSHSPIDKVLLLLQVCKSVYKAMGTQPDQEVGSEDFLPALSYV
LVQCNVPQLLLETEYMMELLEPAWLTGEGGYYLTSVYASLCLIQNKPGTTPTCTLTNEAQ
EYLREWSRRRGQEAKTQKDSQQRQRFIRVLFQGDGRSAVRTLLWKAGESVDALTQSCAAV
FGVSEPQHYCLFWRSEGEMCPLPAHVQPHQLGSQEGASLSFLRCDHDFSKMRRLTRGGAV
DLGESVCEE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtctctccagaggagtttaagtgttttggatcgtcttctcctcacacactcc
atatggttgcagctgtcaatcaaccctgactccgcccaccaaatcctgcagcgagagata
gtcgggacgtttctggtgtgtaagtgtagcgcctcccacaggaaggttctgtgtgtgcga
gtgcaggagggaggtgtgtcacagtatcccatccgtgaggaagactccacgttttctcta
gaaagttctgccctgagcttccctgatctctgcagactagtggcgttttacactattagc
agagatgtattacctttcccactggagctccccgaagcaattatacaggccacgacacac
acccagctggaaagcatttcgcatctgggcttagagttctggagctctcagacgtcccct
ggccttcctaacggcccccctccgccctcagcgccccaccggacatccagattgatcagc
ccatgttttgtcaatcccctgttccttcagcctccccaacccagtagaaccgcctcacac
aaacgccaccgcttcaaacgcagcctcagggtccgtgtgtccaatgaaacctctctcagc
ctgtcaggtggagaatcggacctaacccagggggagacacacgggcaaattgccgaccag
ggcggcccgagacggacaggaggattgagcgtgctcaggaggactccggcactcactccc
acttcagtagaggaggacgaacagatgttgggacagataccacccagtaactccttaccc
caaagagacaacgctgaactcaacaaagacacggacaatggtgaggtgtgtctcgctttg
gaaagaacccgagctccttcccttgctgaactggacagcaatagttcttttagcagcttg
gaggaagaggaagcccaggacttcgcccaccaatggccgcctgcggcacgcgggacccgt
ttcccctcagcgaacccgacctcgactctacgccgcatgaccgctgcctttgtatgtgtg
tttgctcctgagcggcgagttgcccgattggtggacgagctctcccatgaaaaacgctcc
acgtttgggtcattggtgcaggacttcttggagaaacagaggcaggagatggaggcctca
acgtatagctctgctgtggagttgcttcagggcttgaggatgtttctgtcccaagccaaa
aatctccttcttgaagccggagagattgaacctccaattgagacactggtgcctgagaac
gagaaagatctagccctggaaaaggctctgtttggctgcgtgttgaagccgttgaagatt
cagctgcaccagacgctcgtatctctccacactcaggacggctctttacggaggatcaca
gacagcttgctggcctaccaggagggggcgctggagcgcctggctgtgcgagtgggagtc
ctggacgttcgtggtatagaccgagcgaaggcaaagctcacgctgatgcagcgcagccat
tcgcccattgacaaggtgttgcttctgctgcaggtgtgcaagagtgtgtacaaggctatg
gggacgcaaccagatcaggaagtggggtctgaggatttcctaccggcactgtcctacgtg
cttgttcaatgtaatgtcccacaactgctgctggagacggagtacatgatggagctgctt
gagccggcatggctgaccggagagggtggatactatttgacgagcgtgtatgccagcctg
tgcctgatccagaacaagcctgggaccacgcccacctgcactctgaccaatgaggctcaa
gagtacttgcgggagtggagcaggaggcggggccaagaagccaagacccagaaggacagt
cagcagagacagaggttcatccgtgtgctgttccagggtgacggtcgcagtgcagtgcgg
actctcctctggaaggcgggggaaagcgtcgacgctttgacccagtcctgcgccgctgtg
ttcggcgtgagcgagccgcagcactactgtctgttctggaggagtgaaggggagatgtgt
cctctcccggcccacgttcagccccatcagctgggctcgcaggagggagcgtccctgtcc
ttcctgcgctgcgatcacgacttcagcaagatgcgcagactcaccagagggggcgctgtg
gatctgggagagtccgtgtgtgaggagtga
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