Pimephales promelas (fathead minnow): 120470175
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Entry
120470175 CDS
T08155
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120470175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
120470175
NCBI-ProteinID:
XP_039515558
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSGPNWLPPRTLGSSDRATAPMSHSGPALYRPPKKGLPEQRPKYNMYEQNGGTGGNGMPV
RYMATGPSGGSMQHQHQDDRSGSTAYHPLPPQIGERYYAPGQGPKEDHHNWSPHMASHEL
HGRGSEKHISNIDAEIDSLTCMLADLDNHPQSSSAPLYDNVPYSKHGPIDRYNPPNQMGA
PPTSRPSMGYPAQLQNQYHPAPPYNSTPQPDYIYPSVASSVHKPYPQPVPASYTTASTPT
GPRFTVQVKTAQPVTYSQSGRQAEQAYTPPPPRQHASRPPQQDRPHYENQGQGWYPPPPP
PAQEPHGDPAAYKGGAGNMPGGRAGQGVPVKMSQDQVSAYQSNKQGSAPRPEEELDRLTK
KLVYDMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYA
LDRKSYCESCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDA
TSQIHCIEDFHRKFAPRCSVCCQPIMPEPGQEETVRIVALDRSFHVNCYVCEECGLLLSS
EAEGRGCYPLDGHILCKSCSARRIQDLSAKISTDC
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccccaactggctgcctccaagaaccctgggtagttcagatagagccacagca
ccaatgtcacactctggccccgctctctacagacctcctaagaaaggcctccccgaacag
aggcccaaatataacatgtatgagcagaatggcggaacaggaggaaatgggatgcctgta
agatatatggcgactggaccttcagggggatccatgcaacaccagcatcaagatgatcgc
tcagggtctactgcctatcatccattgcctccccaaataggagagcgatactatgctcca
ggccaggggcccaaagaagaccaccacaactggagcccccacatggccagccatgaactt
cacggtcggggatcagagaagcacatctccaatattgacgccgagatagactctcttaca
tgcatgctggctgacctggacaatcaccctcagagctcaagcgcaccgttgtatgacaat
gtgccttacagcaagcacggtcctattgaccgctataaccctcccaaccagatgggggct
ccaccaacaagcaggccctcaatgggctaccccgctcaactccaaaaccagtaccacccc
gccccaccatacaactctacacctcagccggactatatttacccctctgtcgcctcttca
gtccataaaccttacccacaaccagtgcctgcctcctacaccactgcctccaccccgacc
ggtccacgctttactgtacaggtgaaaacggctcagcccgtcacctattctcagagcgga
cgacaggcagagcaagcgtacaccccacctccgccccgtcagcatgcctctcgcccccct
cagcaagatcggccacattatgaaaatcagggacagggctggtacccaccgccacctcct
cctgcacaagagcctcatggagatcccgctgcctataagggaggagcggggaatatgcca
ggggggagagccggccagggagtgccggtgaagatgagtcaagaccaagtgtcagcatat
cagtctaacaagcaggggtcagctccgcgtccagaggaagagttggatcgactcaccaag
aagttggtgtatgacatgaatcatcccccaactgaggaatattttggtcgatgtgctcgg
tgtggggataatgttctgggagacggcagtggctgtattgccatggagcaggtgtttcac
gtggagtgtttcacctgcatcacctgtcatgccagactgagaggtcagcccttctacgca
ttagacaggaagagctactgcgagagctgctacattagcacacttgagcgctgttcaaaa
tgctctgagcccatcctagaccggatcctgagggcgatgggaaaggcttatcatcctcgc
tgtttcacctgtgtggtttgcggctgttgtctggacggagtgccgtttactgtggatgcc
acatctcagatccactgtattgaggacttccacaggaagtttgccccccgctgctcagta
tgttgtcagcccataatgccagagcccgggcaggaggagaccgtgaggatcgttgcactg
gatcgcagttttcatgttaactgctacgtatgtgaggagtgtggtcttctcctgtcttca
gaggccgagggaagaggctgctatcccctggacggacacatcctgtgcaagagttgcagc
gctcgtcgcatccaagacctttctgccaaaatctccaccgactgctaa
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