KEGG   Pimephales promelas (fathead minnow): 120470226
Entry
120470226         CDS       T08155                                 
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pprm03000]
    120470226 (sox19a)
Transcription factors [BR:pprm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    120470226 (sox19a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1
Other DBs
NCBI-GeneID: 120470226
NCBI-ProteinID: XP_039515644
LinkDB
Position
Unknown
AA seq 301 aa
MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGTGKSTVNGQQQQQQQQGGDPMDKVKRP
MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKE
YPDYKYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYAG
MQTDALGYSQQLHRYDLSALQYPSAMATAQSYMNSANSYTPMSYSSTPQQPSPVMSMVKP
DQVSHSPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTH
I
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtacagcatgctggaacacgatatgaagtccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgaacggtggagtgactcacggaaccggcaaatcgactgtcaac
ggccaacaacaacaacaacaacaacagggtggcgatcctatggacaaagttaagaggcca
atgaacgcgtttatggtttggtctcggggtcagaggcgcaaaatggcacaggagaacccc
aaaatgcacaactctgagatcagcaagcgcctgggcgccgagtggaagctgctgacggac
gcggagaaacggccgtttatcgacgaggccaagcggcttcgcgcactgcacatgaaggaa
tacccagattataaatacaaaccccgccgtaaaacaaaacccgtgctgaagaaggacaac
ccggctgctaagtatcccctatcagccggtaacttactggcggcagccgcggctcagggg
tcaggtggaagcccgcggatggacagctacggctggggtcacacaggtggctatgctggc
atgcagacggacgctctgggttacagtcagcagcttcaccgctatgatctgtccgccctg
cagtatccatccgccatggccacagcacagtcttacatgaatagtgccaactcctacacc
cccatgtcttacagcagcactccacagcagcccagcccggtcatgtccatggtgaaaccg
gaccaggtgtctcactctcccactggagcccacagccatcagaggggtcctttacaagga
gacctgagggacatgattagcatgtatatccctggtggagacaccacagacagtggagca
cagagaggctattccaatatccaacagcattacctcaccggtacagcgcctctcactcac
atctga

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