Pimephales promelas (fathead minnow): 120470278
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Entry
120470278 CDS
T08155
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120470278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120470278
Membrane trafficking [BR:
pprm04131
]
Endosome - Golgi transport
Others
AP-1 complex
120470278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
PDS5
Cnd3
Arm
HEAT_GCN1
HEAT_MROH2B_C
XMAP215_CLASP_TOG
NELF-A_N
PIK3R4-like_middle
Arm_2
HEAT_spiro
FANCI_S3
API5
Transposase_22
Motif
Other DBs
NCBI-GeneID:
120470278
NCBI-ProteinID:
XP_039515729
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MEWASQLCENRGLGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQTINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVQHRRLPPRVGSVESAESPDVGQSGPSEAPSAVIPSQGDLLGDLLNLDLAPPTATVP
SVQPSMQMGAMDLLGGGLDSLMGDESDTPGVSHRTEVHSPQPSSDYSEREVGVGVLTF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggcaagtcaactatgtgagaaccgaggcttgggatccaagatgacagactcc
aaatatttcaccactaccaagaaaggggagatctttgagttgaaggcagagctcaatagt
gataagaaagagaagaaaaaggaggcagtgaagaaggtcattgcgtctatgacagtggga
aaagatgtcagtgctctgtttcctgatgttgtcaactgcatgcagacggataatctggag
ctgaaaaagctggtttatctgtatttgatgaattatgccaagagccaaccagacatggcc
attatggcagtgaacacctttgtaaaggactgtgaggacccaaaccctctgatccgtgcg
ctggctgtgcgcaccatgggctgcatccgagtggacaagatcacggagtacctgtgtgaa
cctctgaggaagtgtctgaaagatgaagacccctatgtgaggaagactgctgcagtttgt
gttgctaagctccatgacattaacgcccagctggtggaagaccagggcttcctggacacc
ctaaaagacctgatctctgactcaaaccccatggtggtagcaaatgcagttgcggctctg
tccgagatagcagaatctcatcctaacagcaaccttctggacctgaatcctcagaccatt
aataagcttctgacagcccttaatgaatgcactgaatggggtcagatcttcatcctcgac
tgcctggccaactacacaccccgtgacgaccgcgagtcacagagtatctgtgagcgtgta
actccacggttgtcccacgccaactctgccgtggtgctgtctgccgtgaaggttctgatg
aagttcatggagatgcttcctaaagatctagattattacggcaccctgctaaagaaactt
gctcctcccttggtcacgctcctctcagctgaacctgaactgcagtatgttgccctaagg
aacatcaacctcatcgtacagaaacggcctgaaattctaaagcatgaaatgaaggtattc
tttgtgaaatataatgatccgatctatgtcaagctggagaagctggatatcatgatccgc
cttgcgtctcaggccaacattgctcaggtgctggctgagctgaaggaatacgccactgaa
gtggacgtagactttgtgcgtaaagctgtacgagccattggccgctgcgctattaaagta
gagcaatcagcagagcgttgtgtcagcacgctgcttgacctcattcagaccaaggtcaat
tatgtggtgcaggaagctattgtggtcatcaaggacatcttccgaaagtaccccaacaag
tacgagagcgtgattgccaccctgtgtgagaacctcgactctctggatgagcctgaggcc
cgggcagcaatgatctggattgtgggagagtacgcagagaggattgacaatgctgacgag
ctgctggagagcttcctggaaggctttcatgatgagagcacacaggtgcagttgcagttg
ctgacagctattgtgaagttgttcttgaagaaacccaccgagacccaggagctggtgcaa
caagtgctcagtctcgccacacaggattctgataaccctgatctgcgcgaccgtggctac
atctactggcgtctgttatctacagaccctgtggcagctaaagaggtggtgctggctgag
aagcctctgatctcagaggagacagacctgattgagcccaccctgctggaggagctcatc
tgccacattggtactctggcctcagtctaccacaaaccccccagtgcttttgtggagggc
agccgtggcgttcagcataggagacttcctcctcgtgttggctctgttgagagtgctgag
agccctgatgttggccagtctggaccttctgaagctccatccgctgtcattccatcacag
ggtgatctcctgggtgacctgctgaacctggatctggccccgcccactgccactgtccct
tcagtgcagccctcaatgcagatgggagccatggacctactgggaggaggtctggatagt
ctgatgggcgatgaatcagatacgccgggtgtttcccacaggacagaggtgcattctccc
cagccatcttctgattatagtgagagagaggtcggtgtgggtgttctcaccttttga
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