Pimephales promelas (fathead minnow): 120470297
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Entry
120470297 CDS
T08155
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120470297 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120470297 (nelfb)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
120470297 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
120470297
NCBI-ProteinID:
XP_039515754
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQAENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKEEDRYVKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKETALFSNDL
SILHNFFSPSPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFSWCLDACIREKFVDAKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPELLLLLRMLSLGQGAWDMIDSQVFK
EPRMDLEVVTRFLPAMMSIVVDDYTFTVEQKLPSEEKTSQTYPTTLPETFSRYIQENRVA
CEIGLYYALHIAKQRNKNALQRLLPGLVDTYNDMAFGDIFLHLLTGHLTLLSDEFGSEEF
CTAVFDNFLLTSFSSKENVHRHSLRLLNHLHQKVLASYMETLMKTLEPPKQSSESVKELY
TLLKEKLEASKKSPPEPEEAPSLDLGLHPVTVPPTPSTPTTPV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagggttacctgagctgggaatatccaatggagaagatctgaaagaaactctc
actaactgtacagaacccctgaaagccatcgaccagtttcaggctgaaaatggcatattg
ttgccaaccctacagtctgcattgcctttcctggatcttcacgggactccgcggctggag
tttcatcagtcagtgtttgatgagcttcgagataagctgatggagcgcgttgccaccatt
gccgagggcaaggaggaggacagatacgtaaagctggaagaacttcttgagaagagcttc
ccattggtgaagatgccgtccatacagcccgttgtcatgcaagtcctcaaacatctgcct
aaggtgcctgagaagaagctgaagcaggttatggccgataaagagctgtacaaagtctgt
gctgtggaggtgaaacggcaaatttggcaggacaatcaggctcttttcggtgacgaggtg
tctccgctcttgaaacagtatattgtggagaaggagacggctctttttagcaacgacctc
tccatccttcataactttttcagtccttcacccaaaacacggcgacagggtgaggtggtg
ctgaagctgactcagatgattgggaagaatgtgaagctctacgatatggtactacagttc
ctgcggacgctgttcctgcgaacacgaaacgtgcactactgcaccctacgtgctgagctg
ctcatgtcccttcatgacctcgacatcagtgagatctgttcagtcgacccctgtcacaag
ttttcttggtgtttggatgcctgcatcagggaaaagtttgtggatgctaaacgggctcgt
gagttgcaaggcttcctggatggtgtgaagaaagggcaggaacaagtattaggtgacctg
tcgatgatcctctgtgatccgtttgcctgtaacactctagtgttgagcaccgtgaggaac
cttcaggagctattgagccaggacgccctccccagagacagccctgaacttctcctcctg
ctgcggatgctttctcttggccagggggcctgggacatgattgacagccaggttttcaaa
gagccccgaatggatttggaggtggtaacacgctttctgcctgccatgatgtcaatagtg
gtggatgactacactttcactgtggagcagaaactaccaagtgaggagaagacctctcaa
acataccccaccaccctgcctgaaaccttctccaggtatatacaggaaaacagggtggca
tgtgagatcggtctttattatgcacttcatatcgctaagcagaggaataaaaatgcttta
cagcggcttctgcctggactggtggatacctataacgacatggcgtttggagacatcttc
ctccatcttctcactggtcatctaactctgctctctgatgaatttggatcagaggagttc
tgcactgctgtctttgacaacttcctcctcacatctttctctagtaaggagaacgttcac
agacacagtctgcgcttgctgaaccatctgcatcagaaggtgctggcgtcctacatggaa
accttaatgaagacacttgaaccgccaaaacagagcagtgagtcagtgaaagaactgtac
accctgttgaaggagaagcttgaggcttctaagaaaagcccccctgaaccagaggaagcc
ccctctctggatttaggccttcaccctgttactgtgcctcccaccccttccacccctacg
acccctgtctga
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