KEGG   Pimephales promelas (fathead minnow): 120470297
Entry
120470297         CDS       T08155                                 
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120470297 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pprm03021]
    120470297 (nelfb)
Transcription machinery [BR:pprm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     120470297 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 120470297
NCBI-ProteinID: XP_039515754
LinkDB
Position
Unknown
AA seq 583 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQAENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKEEDRYVKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKETALFSNDL
SILHNFFSPSPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFSWCLDACIREKFVDAKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPELLLLLRMLSLGQGAWDMIDSQVFK
EPRMDLEVVTRFLPAMMSIVVDDYTFTVEQKLPSEEKTSQTYPTTLPETFSRYIQENRVA
CEIGLYYALHIAKQRNKNALQRLLPGLVDTYNDMAFGDIFLHLLTGHLTLLSDEFGSEEF
CTAVFDNFLLTSFSSKENVHRHSLRLLNHLHQKVLASYMETLMKTLEPPKQSSESVKELY
TLLKEKLEASKKSPPEPEEAPSLDLGLHPVTVPPTPSTPTTPV
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgttcgcagggttacctgagctgggaatatccaatggagaagatctgaaagaaactctc
actaactgtacagaacccctgaaagccatcgaccagtttcaggctgaaaatggcatattg
ttgccaaccctacagtctgcattgcctttcctggatcttcacgggactccgcggctggag
tttcatcagtcagtgtttgatgagcttcgagataagctgatggagcgcgttgccaccatt
gccgagggcaaggaggaggacagatacgtaaagctggaagaacttcttgagaagagcttc
ccattggtgaagatgccgtccatacagcccgttgtcatgcaagtcctcaaacatctgcct
aaggtgcctgagaagaagctgaagcaggttatggccgataaagagctgtacaaagtctgt
gctgtggaggtgaaacggcaaatttggcaggacaatcaggctcttttcggtgacgaggtg
tctccgctcttgaaacagtatattgtggagaaggagacggctctttttagcaacgacctc
tccatccttcataactttttcagtccttcacccaaaacacggcgacagggtgaggtggtg
ctgaagctgactcagatgattgggaagaatgtgaagctctacgatatggtactacagttc
ctgcggacgctgttcctgcgaacacgaaacgtgcactactgcaccctacgtgctgagctg
ctcatgtcccttcatgacctcgacatcagtgagatctgttcagtcgacccctgtcacaag
ttttcttggtgtttggatgcctgcatcagggaaaagtttgtggatgctaaacgggctcgt
gagttgcaaggcttcctggatggtgtgaagaaagggcaggaacaagtattaggtgacctg
tcgatgatcctctgtgatccgtttgcctgtaacactctagtgttgagcaccgtgaggaac
cttcaggagctattgagccaggacgccctccccagagacagccctgaacttctcctcctg
ctgcggatgctttctcttggccagggggcctgggacatgattgacagccaggttttcaaa
gagccccgaatggatttggaggtggtaacacgctttctgcctgccatgatgtcaatagtg
gtggatgactacactttcactgtggagcagaaactaccaagtgaggagaagacctctcaa
acataccccaccaccctgcctgaaaccttctccaggtatatacaggaaaacagggtggca
tgtgagatcggtctttattatgcacttcatatcgctaagcagaggaataaaaatgcttta
cagcggcttctgcctggactggtggatacctataacgacatggcgtttggagacatcttc
ctccatcttctcactggtcatctaactctgctctctgatgaatttggatcagaggagttc
tgcactgctgtctttgacaacttcctcctcacatctttctctagtaaggagaacgttcac
agacacagtctgcgcttgctgaaccatctgcatcagaaggtgctggcgtcctacatggaa
accttaatgaagacacttgaaccgccaaaacagagcagtgagtcagtgaaagaactgtac
accctgttgaaggagaagcttgaggcttctaagaaaagcccccctgaaccagaggaagcc
ccctctctggatttaggccttcaccctgttactgtgcctcccaccccttccacccctacg
acccctgtctga

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