Pimephales promelas (fathead minnow): 120470312
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Entry
120470312 CDS
T08155
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120470312 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120470312 (rorb)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120470312 (rorb)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120470312 (rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120470312
NCBI-ProteinID:
XP_039515778
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHIIDMPKGQTNGAPGGYYGMDSTQASPDQSGLDITG
MKQIKQEPIYDLTPVPNLFTYGSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQYTAEEL
QQLAWQTHSYEEVKMYQSKTRDVLWQQCAMQITHAIQYVVEFAKRITGFMELCQNDQILL
LKSGCLEVVLVRMCRAFNPLNNMVLFEGKYGGMQIFKALGCDDLVSAVFDFAKSLCSLQL
TEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHLDEDALAKLISRIP
TLSALCTLHTEELQAFQQLHPETVNMLFPPLYKELFNPDATGVMPK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaattgaagtcataccatgcaaaatctgtggagacaagtcatcaggcatc
cactatggagtcatcacatgtgaaggctgtaagggtttctttaggcgcagtcaacagaac
aacgcctcctactcctgtccccgtcagcgcaactgcctaattgaccgaacaaaccgcaac
cgctgccagcactgtcggctccaaaagtgcctggctttgggcatgtcccgtgatgctgtt
aagtttggccgcatgtccaagaaacagagagactccttgtacgcagaggttcaaaaacac
cagcagaggctgcaggagcagcggcagcagcagacgggcgaagcggaggccctcgctcgt
gtttactcctccagtctcaccaacggcctcagcaccctcaaccatgaaattggagggaca
tacgccaatggtcacattatagacatgcccaagggtcagacgaacggcgctcccggaggt
tactacggcatggactccacacaggccagcccggatcagtctggactggacataactgga
atgaagcagatcaagcaggaacccatatatgatctcactcctgttcccaaccttttcacc
tacggctcctatcaagatagccagctagcacctggagtgtccatgggggaattagaccga
attgcacagaacatcataaagtcccacctggagacgtgtcagtacacagcagaagagctt
cagcagctggcctggcagacgcactcctatgaagaggtcaagatgtaccaaagcaagaca
cgggacgtgttgtggcagcagtgtgctatgcagataactcatgccattcagtatgtggtc
gagttcgctaagcgcatcactggcttcatggagctttgccagaacgaccagatattgctg
ctgaaatcaggttgtctggaggtagtgctggtcagaatgtgccgggcattcaaccctctc
aacaacatggttctgtttgaggggaaatatggaggcatgcagatatttaaagctctaggt
tgtgacgacctggtcagtgcggtgtttgactttgccaagagtttgtgttcactgcagtta
acggaggaggagatcgcccttttttctgctgcggtgctcatttctacagaccggccttgg
ttaatggagcccaggaaagtgcagaagctacaagagaaaatctactttgccctgcagcac
atcatgcaaaagaatcatctggacgaggatgccctggccaagctgattagccggatccct
acgctgtcggctctatgcactctccacacggaggagctccaggccttccagcagctccac
ccagagaccgttaacatgctctttcctcctctctataaggagctcttcaatcctgacgcc
actggcgtcatgcccaaatga
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