Pimephales promelas (fathead minnow): 120470359
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Entry
120470359 CDS
T08155
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120470359 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprm03009
]
120470359 (efl1)
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
Pre-60S particles
GTPases
120470359 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
120470359
NCBI-ProteinID:
XP_039515835
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MGHTSLEKIIALQKKTSQIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHCTTGGNDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKLTSLEAYAHLQKILEQVNAVTGTL
FTSKVLEERAEKNADAQKLCTEHDSGDQVYDWSAGFEETDDSDLYFSPDRGNVVFASAID
GWGFRIHQFAEMYSKKMGIRFWVLLKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQLVLD
NIWSMYDAVVTTRDKEKVEKMVTSLGIKVMPRDLKHSDPKVLLSAICGQWLPVSQAVLSM
VCEKLPSPAEISAERVEKLMSVGARRFDSLPEKTQELKKAFLDCSADETAPVIVFVSKMV
SVDSKALPQNKQRPLTQEEIAQRRELARQRHAERQAANQSAESPGSADAGDALCAQTEAL
SVKIAVEEENKEHFVAFARVYSGVVRKGQKVFVLGPKYDPSLALRVLPEGCSVADALPSV
PHMACCTVDSLYLLMGRELEELEEVPSGNVLGIGGMEEFILKSATISTSPACPPFTPINF
EATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCLD
DLRERFAKIEISASEPIIPFRETVIRPPKVDMVNEDLGKQQKVAVIHQVKDEQTKYHEGV
QVDSTGLVTLTTSNKMATVRVRAIPLPEEVTRLLEDNVELIRTIEQFSLFAWEGKTLEIN
QKILENIQDFKVKLESTLQGHKWRGAVEHIWAFGPRRCGPNILLNRIEGYRRPSVWQCLG
REKEIEKAETNAFRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVESWDMKISTPLTQKD
SIEEESHLQSQIGEYSDVSSTSTNRSRSRAETAGGSLDCYGPFSGQLIAAMKETCRYAFQ
AKPQRLMAAMYTCEIMATAEVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESF
GFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTEEEYLHFGEKADSANQALKYMNAV
RRRKGLYVDEKIVEHGEKQRTLSKNK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacacaagtttggagaagataattgcactgcagaagaaaacatcacagatcaga
aatctgtgtattcttgctcatgtagatcatggaaagacgacgttagccgactgtctcgtg
gcgagtaatggtattatatccagtcgtttagcaggaaagctacgatatctggacagcagg
gaggatgagcagatcagaggaattacaatgaagtccagcgctatttcactacattgcaca
acaggaggaaatgattacctcattaatctgatcgactctcctggtcatgtggacttctcc
tcggaggtgtccactgccgtcagactgtgtgatggggccattgttgttgttgatgccgtt
gagggagtgtgtccgcagacacaagttgttttacgacaagcttggctggagaatattcgt
cctgttcttgtcattaacaaaattgaccggctgattgtggagctgaaactcacttcactg
gaggcgtacgctcacctgcagaaaatattagagcaggtgaacgcagttaccggcacgtta
ttcacctctaaagttctggaggagagagcggagaaaaacgcagatgctcagaagctctgt
acagagcacgacagcggagatcaggtgtacgactggagtgcgggttttgaggaaactgat
gactcggacctctacttcagtcctgaccggggaaatgtggtatttgccagtgctatagac
ggctggggcttcagaatccatcagtttgctgagatgtacagtaagaagatgggcatccgc
ttctgggttctgctcaagactctttggggcgatttctacctcaatgccaaagccaaaaaa
atcatgaagggagctcagtccaaaggaaagaaacctctgtttgtgcagcttgtcctggat
aacatctggagtatgtatgatgctgtggtcactacaagggacaaagaaaaggtggagaag
atggtgacttctctggggataaaagtcatgcctcgtgacctaaaacactcggaccccaaa
gtgctcctcagtgccatctgtggccagtggcttcctgtgtctcaagccgtgctctcaatg
gtgtgtgaaaagctgcccagcccagctgagatctcggctgagagagtggaaaagctgatg
agcgtgggagcgcgcaggtttgactccctgcccgagaaaacacaggagctaaaaaaagca
tttctagattgttctgctgatgagacggcacctgtaattgtctttgtgtcaaagatggtt
tctgtggactccaaagctctgccacagaacaaacagaggccattgactcaggaagagatc
gcccagaggagagaactggccagacagcgtcacgccgagagacaagctgccaatcagagt
gcagaaagccccgggtcagctgatgctggagatgctctgtgtgcgcagacagaggctctt
tcggtcaaaatcgcagtggaggaggaaaacaaagagcattttgtggcctttgcacgagtc
tacagcggtgtcgtcagaaaaggccagaaggtgtttgtgctcggacccaaatacgatcca
tcactggcgctcagagtgcttcctgagggttgttcagtagctgatgctttacccagcgtc
ccccacatggcctgctgcaccgtagacagcctctacctgctgatgggccgcgagctggaa
gaactggaggaagttccctcaggaaatgttctcggtattggtggcatggaggaattcatt
ctcaagtcggccaccatctccacatctcctgcctgcccacccttcacgccaatcaacttt
gaagctacgcccatcgtcagagtagcaatcgagcccaaacatccaagtgagatgccaaag
ctggtgcggggtatgagactgctgaaccaggccgacccttgtgccgaagtgttgattcag
gagactggagagcatgttctggtcactgccggggaagtacaccttcaacgctgtctggat
gacttaagagagaggtttgctaaaattgaaatcagtgcttccgaaccaatcattccattt
cgcgaaacggtgatccggcctcccaaagtggacatggtgaacgaggacttggggaagcag
cagaaagtcgctgtgattcaccaggtaaaggacgaacaaacaaagtatcacgaaggggtc
caggtggattccaccggtctggtcacgctcaccacctcaaacaagatggccacggtcagg
gtgcgggctatccctcttcctgaggaagtcacccgccttctggaggacaatgtggagctc
atccgcacaatagagcagttcagcctgttcgcctgggagggcaagactctggaaatcaac
cagaaaattctggagaacatccaggacttcaaggtgaagttggagagcaccctgcaaggc
cacaaatggaggggtgccgtggagcatatctgggcatttggtcctcgccgttgtgggcca
aatattctcctcaacagaatcgaggggtaccggagaccctcagtgtggcagtgtctggga
cgagagaaggaaattgaaaaggccgagaccaacgcatttagagactttgacaacagcatt
gttagtggcttccagttggccacactctctggccccatgtgtgaagaacctttaatgggg
gtttgcttctctgtagagtcctgggacatgaagatttccacacctcttactcagaaagac
tcaatagaagaggagtcccacctgcagagccaaataggtgaatattccgacgtctcatcc
acaagcactaatcgaagcaggagcagagcggaaactgctggtggttcactggactgttat
gggccgttctcaggacagctcatcgctgccatgaaagagacctgcagatacgctttccaa
gctaaacctcagcggctgatggctgcgatgtacacctgcgaaatcatggccactgctgag
gtcctgggtcgtgtgtatgctgttttgtccaagcgggaaggacgagtcctacaagaggaa
atgaaggaagggacggacatgttcatcattaaagctgtacttcctgttgccgagagcttc
ggattcgctgacgagatcaggaagaggaccagcggtctggccagcccacaactagtcttc
agccactgggaggttatccctagtgatccattctgggtgcccactaccgaggaggagtat
ttacactttggagaaaaagcagactcagccaatcaggctctgaaatacatgaacgccgta
cgaagacgcaaaggcctctatgtggatgagaagatcgttgaacacggggaaaaacaacga
actctcagcaagaacaaataa
DBGET
integrated database retrieval system
