Pimephales promelas (fathead minnow): 120470545
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Entry
120470545 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120470545
04121 Ubiquitin system [BR:
pprm04121
]
120470545
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120470545
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120470545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
120470545
NCBI-ProteinID:
XP_039516035
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All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSETEVEDSENNAEREGDITTSFEAEDIVEKKGNTTSIVWTWFGYGKNDQEQVKPVCKIC
RRLVPARTGNTTNLFHHLRRHHPSNYSESMSLRAQAGTTPHTQPSKTTTSSVSIASGSGR
QQSIQSCFAAIAPYDKKTKRSKNITSAITYCLAKDMMPMSTVEKDGFRKLIKVLDPRYEL
PGRKYFSQMALPQLYDECRHKLEIHLKDVKYFATTTDLWSSRTSEPYMSLTIHFIDEEWA
LHSKCLQTVYFPEDHTGEIISQGLEDALKSWGLREESQVCITTDNGANIVKAVSLNGWTR
LQCFGHRLHLAIERSVRDKRIERAMGVCKKVVGAFSFSWKKKKELAATQKELDLPKHRLI
TESPTRWGSRHAMIARILEQEKAISKVLSADRKTRHLAPSWQDIEVLESIHKALNPLVEF
TDALSGEAHVSVSCVKPVLQLFNTEVMKPGEDDTELTKAIKTSITTYLNEKYDDAVTDDL
LNMACLVDPRFKTRYIQDDKVEAVKSRAVAQILCDCQSTPQSLTPRLGRGEADATASAPP
AKMQRKTLGSFFKKSSSVSTSSLTDEQDVEAELNCYLLAPEADSETNPLTWWKIHFTSYP
RVSFLAKRYLCIPATSSPSERAFSTSGNIVSCHRAALKPDVVDRLVFLAKNL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaactgaagttgaagacagcgaaaataatgccgaacgtgaaggcgacatcact
acatcattcgaggccgaagacattgttgaaaaaaaaggtaacacgacgtcaattgtgtgg
acgtggtttggatacggcaaaaacgaccaggaacaggtgaagccagtctgcaaaatatgc
cggcggttggtaccagccaggacggggaatacaaccaatcttttccatcacctgagacgg
caccaccccagtaattactctgagagcatgagtctgcgtgctcaagctggaacgacacct
cacacacagccaagcaaaaccactacgtcgtctgttagcattgctagcggcagcgggaga
caacaatccatccagtcgtgctttgccgccattgccccgtatgataaaaaaacaaagagg
agcaaaaatataacgagcgctattacttattgcctcgctaaagatatgatgcccatgagt
acagttgaaaaagacggcttcagaaaactgattaaagtgttagaccccaggtacgagctc
cctggtagaaaatacttttctcagatggcgctgccacagctttatgatgaatgccgtcat
aagctggaaattcatctgaaggatgttaaatactttgccactaccactgatctttggtct
agccgcacatcggagccctatatgagtctcacaattcatttcattgacgaggagtgggct
ctacacagcaaatgtttacagacagtatactttccagaggaccatactggggaaatcatc
agccaggggctggaggatgcactcaaatcctggggccttagggaagagagtcaggtgtgc
atcacaacagacaatggggcaaacattgtcaaggctgtttccctcaatggttggactcgg
ctgcagtgctttggtcatcggctgcaccttgccattgagcgaagtgtgagagacaagaga
atagagagagccatgggtgtgtgcaaaaaagttgttggcgctttctcattctcatggaag
aagaaaaaagaactagcagctacacaaaaggagcttgacctaccaaagcaccggttaata
acagaatcacctaccaggtggggttctcgccatgcaatgattgcacgaatactggaacag
gagaaggccatttcaaaggtgttgtcagctgatagaaaaacaaggcacctggctccctca
tggcaagacattgaggtcttggagtccatacacaaggcccttaatccacttgtagagttc
actgatgccttatctggtgaagcacatgtcagtgtctcttgtgtgaaacctgtcctacag
ctcttcaatacagaggtcatgaagccaggagaggatgacacagagctaaccaaggccatc
aaaacttccatcaccacatatttaaatgaaaaatatgatgatgctgtcactgatgacctc
cttaacatggcatgccttgttgaccctcggttcaagacccgctacatccaagatgacaag
gtagaggctgtgaaatccagagctgtggctcagatcctgtgtgactgtcagagcacaccg
cagtctctcacacccagattgggcagaggcgaggcagatgctacagcttcagctccacca
gccaaaatgcagaggaagacactggggagctttttcaagaagtcctcctctgtttctacc
tctagtctaacagatgagcaggatgttgaggctgaactgaactgttacctgctagctcca
gaagcagacagtgagaccaaccccctgacatggtggaaaattcacttcacatcatacccc
agagtgagcttcctggcaaagcggtatctatgtattcctgccaccagctcaccctcggag
cgtgcttttagtacgagtggcaatattgtgtcctgccatagggctgctttaaagccagat
gtggtggacagacttgtttttctagcaaaaaacctataa
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