KEGG   Pimephales promelas (fathead minnow): 120471109
Entry
120471109         CDS       T08155                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120471109 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120471109 (cdc5l)
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120471109 (cdc5l)
Spliceosome [BR:pprm03041]
 Complex B
  Other components
   Prp19 complex
    120471109 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    120471109 (cdc5l)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    120471109 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072
Other DBs
NCBI-GeneID: 120471109
NCBI-ProteinID: XP_039516777
LinkDB
Position
Unknown
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRENEDDVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMELYDPLEPDFK
RLRQQHLDKDLRSEKEDRERKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPKTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGA
EGMTPQGGMTPKPSVGVTPGRTPLRDKLNINTEEGSVDYSDPSFAKHLQRESREQLKLGL
MSLPVPKNDFEIVLPENAEKELEEAEVDESFVEDAAEIELRKQAIRDAEREKELRQRHTA
VQRDLPRPSEVNETILRPHNVEPPLTDLQLAEELVKKEMITMIHYDCLHHPFSDIQARKG
KGVGSSSNNAEHISYLEKTPYDKISEEELKKAGELLGQEMEVVKHGMSHGDLSMEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESMEKKLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLLKQLSELWDQVEQANVELHTFQELKKQEDHAIPRRKEALREDVQRQQER
EKELQQRFADLLLEKQTLSQKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggaggcgtgtggcgcaacacagaggatgagattctcaaa
gcagctgtaatgaaatatggcaaaaatcagtggtctcgaatcgcatccctgctgcaccgc
aaatcagccaaacagtgtaaagccagatggtatgagtggctggaccccagcattaagaaa
acagaatggtcacgtgaggaagaggagaaacttcttcatttggctaaactgatgcctact
cagtggagaacaatcgcccctatcattggacgaacggctgctcagtgtctggagcattat
gaatttctgctagataaagctgctcagagagagaatgaagatgatgttggcgatgaccct
cgcaaactaaaaccgggagagatcgacccaaaccctgagaccaaaccagccagacctgac
cctgtggatatggatgaagatgagctggagatgctgtctgaagcaagagctagattggcc
aacacacaaggcaagaaggcaaagcggaaggcaagagagaaacagctggaggaagcacgt
cgtctggcagctcttcagaagcgcagggaactgcgagcggcaggtatagacatccagaaa
aagcgcaagaagaagagaggtgtcgactataatgctgagatcccgtttgaaaagaaaccc
gctcagggtttctacgatacgtccatggagctgtatgatcctttggagcctgacttcaag
cgactgcgccagcagcatctggataaagatctcaggagtgaaaaggaggatcgcgaacga
aagaaggacagacagaagatcaagaagaagaaggagtcagatctgccttcggccatcttg
cagaccagtggagtgtcagagttcacaaagaagagaagcaaactggtgcttccggcacca
cagatctctgatgctgagctggaggaggttgtcaaactgggtcaggccagcgaaatcgcc
cgtcagaccgcagaggagtctgggatcaccaactctgcctccagcgccctcctgtctgaa
tacaacgtgaccaataactccatggccctgcgcacacccaaaactccagcggcacaggac
aagatcctgcaggaagcccagaacttaatggcacttacgaacgtggacacccctcttaaa
ggaggactgaatacccccctccatgagagtgacttctctggtgtcactccacagagacag
gtggtccagacgcccaacaccgtgctgtctacacccttcagaacccccagccatggagcg
gagggcatgacccctcaaggtggaatgactcctaaaccctcggtgggcgtgaccccggga
aggaccccgctgcgggacaaactcaacataaacacagaggaggggagtgtggactacagt
gacccgtcatttgccaaacacttgcaaagggagtcccgcgagcagctcaagttgggcttg
atgtctctgcctgtgcccaaaaatgattttgagattgttcttcctgaaaacgctgagaaa
gagctggaggaagctgaggtggacgagagttttgtggaggatgcggccgagatagaactg
cgtaaacaggccataagagatgctgagagggagaaggagctgcgtcagagacacacggca
gttcagagagatttaccaagaccttcagaggtgaatgagacgatactccggcctcataat
gtggagccgcctctgacggacctgcagctggcagaagaactcgtcaagaaggagatgatc
accatgatccactacgactgtctgcatcaccccttcagtgacatccaggccaggaagggt
aaaggagtgggatccagctccaacaacgcagagcacatctcctacctggagaaaacaccg
tatgataagatctcggaggaagagctcaaaaaggcaggagagctgctgggccaggagatg
gaggtggtgaaacatgggatgagtcatggtgatctctctatggaggcttataatcaggtg
tgggaggagtgttacagtcaggtcctgtacctgcccggacagagccgctacacccgagcc
aatctggccagcaagaaggaccgaatcgagtctatggagaagaagctggagattaacaga
ggtcacatgaccacagaagccaagcgtgcggcgaaaatggagaagaagatgaagattctt
ctgggcgggtatcagtctcgggccatgggactgctcaaacagctcagtgaactctgggat
caagtggaacaggcaaacgtggagctccacaccttccaggagctgaagaaacaggaagac
cacgccattccacgcaggaaggaggccctgagagaggatgttcagaggcaacaggagaga
gaaaaagagctgcagcagagattcgcagaccttctcctggagaaacagacgctctcgcag
aagttctga

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