Pimephales promelas (fathead minnow): 120471177 Help Entry 120471177         CDS       T08155                                  Symbol xrcc1 Name (RefSeq) DNA repair protein XRCC1   KO K10803   DNA-repair protein XRCC1 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03410   Base excision repair Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     120471177 (xrcc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pprm03400]     120471177 (xrcc1) DNA repair and recombination proteins [BR:pprm03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      120471177 (xrcc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C Motif Other DBs NCBI-GeneID:  120471177 NCBI-ProteinID:  XP_039516868 LinkDB All DBs Position Unknown AA seq 614 aa AA seqDB search MPEIKLKHIVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGSNTNRVRFFGPNQLVKATA QEKWDRVKVVCSQPYSKSIAYGITFIKLHSPPDGNDVPITTPPKLTKLGQFRVKDESPSS GSNIQPGSLFFSRESTAKSSTGLKVSPQNERLSYATAALKSDASSTQTSSSSTSTQQAPV KRKFEFSKERLEATGPPPKKPSSSASSEPNSATPKSKARTSATASPITTGQKTPDKRESP KSKPEPKPKPKPKPKSAEPVAFNRILEGVVFVLSGFQNPFRGELRDKALAMGGRYKPDWT PDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCYKTKQKISFKRYLMDGAESSSESED EQDESEEEAQKTKTPEKRHVTPKKQPIKEEEEYGGSTDAEGPEDDASGMDTEDELNRVEM ESRKKKAAKASPAKVKDEDLYGGSTDENTDAEEDEDIPIPELPDFLKGKRFYLYGKFPDN QKRQLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEDALMENGSLSFVKPSWIFAIND RQKMLPYQPYTVVP NT seq 1845 nt NT seq  +upstreamnt  +downstreamnt atgcctgaaatcaaacttaagcatattgtgtcttgcagcagtgaggacaatactcacaag gcagacaacctcttgagctctgacacgtacagaaagtggaaagctgcaagacctggagag aagcaagtttcagtcattcttcaattggaaaaggaagagcaaattcacagcatagacatt ggaaatgaaggctctgctttcattgaggtccttgttggacactccacgtcagtcaaagat caagactttgaggttctgttggtcacgtcgtccttcatgtcacccacagagagccgtaac ggctcaaacacaaaccgagtgcgcttcttcggacccaaccagctggtgaaggccacggcg caggagaagtgggaccgtgtgaaggttgtgtgcagtcagccttacagcaagtcgatagcg tatggaatcacctttataaagctgcattctcctccagacggcaatgatgttcccatcacg actccaccgaaactaactaaactgggtcagttccgtgttaaagacgaatccccgtcttct ggttcaaatatccagccgggaagtctgttctttagcagagagagcactgctaaatccagc actggactgaaagtgtctcctcagaatgaaaggttgagttacgccactgctgcgctgaag tccgacgcttcgtccacacagacgtcttccagcagcaccagcacacaacaggctcctgtg aagaggaagttcgagttcagtaaagagcgtctggaagccaccggtccaccgcccaaaaag cccagttcatccgcctcttctgaaccaaactctgccactccaaaatctaaagcaagaacc agtgcaactgcaagtcccatcaccaccggccaaaagacaccagacaagagagagagtcct aaatccaagccagagcccaagccaaaacccaaacctaagcccaagtcagcagaaccggtt gctttcaaccgcatcttggagggagtcgtctttgtcctgagtggcttccagaaccccttc cgcggagagctgcgggacaaagccctggccatgggaggccgatacaaacccgactggact ccagactccacacacctcatctgtgcgtttgccaacacgcccaagtacagtcaggtgaag gcagctggaggcattatcgtcaggaaagagtgggtgatggactgttacaaaacaaagcag aagatttccttcaaacggtatctcatggatggagccgagtccagttcagagagtgaagat gaacaggatgagagtgaggaggaagcacagaaaactaaaacaccagaaaagaggcatgtg acccccaaaaagcagccgattaaggaagaagaggagtacggtggctcaacggatgcggaa ggcccagaggatgacgcgtctggcatggacactgaagatgagctgaacagggtggagatg gagagcagaaagaaaaaagcagcaaaggcgagcccagcaaaggtgaaggatgaagatcta tacggcggctccacagatgagaacacggatgctgaggaagatgaggatatacccatccct gaactgccagacttcctcaaagggaagcgcttctatctctacggcaagttccctgacaac cagaaaaggcaacttcagcgctacatcatcgcctttaacggagctgttgaagactatatg agcgagaaggtccagtttgtcatcaccagtgagggatgggacgaatcttttgaggatgcc ttgatggaaaatggaagtctgagctttgtgaagccgtcctggattttcgccatcaatgac aggcagaagatgttaccgtaccagccctacactgtagtcccttaa

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