Pimephales promelas (fathead minnow): 120471194
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Entry
120471194 CDS
T08155
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120471194
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120471194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120471194
03009 Ribosome biogenesis [BR:
pprm03009
]
120471194
04131 Membrane trafficking [BR:
pprm04131
]
120471194
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120471194
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120471194
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120471194
Membrane trafficking [BR:
pprm04131
]
SNARE
SNARE associated proteins
Others
120471194
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120471194
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120471194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
NACHT
AAA_16
RNA_helicase
AAA_2
nSTAND3
AAA_28
Mg_chelatase
NPHP3_N
AAA_17
Viral_helicase1
Parvo_NS1
DUF815
AAA_5
ABC_tran
ATPase_2
NB-ARC
IstB_IS21
AAA_14
AAA_22
AAA_7
AAA_24
AAA_33
ATPase
AAA_11
AAA_25
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
120471194
NCBI-ProteinID:
XP_039516891
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAV
TMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG
MTPSKGVLFYGPPGCGKTLLAKAIANDARQLHLNQGPELLTMWFGESEANVREIFDKARQ
AAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDI
IDPAILRPGRLDQLIYIPLPDEKSRISILKANLRKSPISKDVDVDFLAKMTNGFSGADLT
EICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVS
DNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGGSGPSQSSSGGGGGTVFNEDNDDDLYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgctgatgatgttgatctggagcaggtggcgaatgaaacccatggccatgtg
ggtgctgatctggccgccctttgctccgaggctgctctgcaagccatccgtaagaaaatg
gacctcatcgatctggaggatgagaccatcgacgcagaggttatgaactccttggctgtt
acaatggatgacttcaggtgggctcttagccagagcaacccctctgccctgagagagacc
gtagtggaggtgcccaacatcacctgggaggatattggtggccttgacgatgtcaagaga
gagctgcaggagctggtgcagtacccagtggaacatccagacaaattccttaagtttggc
atgaccccatccaagggtgtgctgttttatggaccaccaggttgtggtaaaaccctactg
gccaaggccattgccaatgatgccaggcaacttcatctcaatcaaggcccagaactgctc
actatgtggtttggagaatcagaggctaatgtccgtgaaatctttgataaggctcgtcaa
gctgctccttgtgtactcttctttgatgaattggactccattgctaaagctcgtggtgga
aacgttggtgatggtggtggagcagctgacagagtcattaaccagatccttacagaaatg
gatggtatgtccagcaagaagaacgtcttcatcattggggccaccaacagaccagacatc
attgatcctgccatcctcaggcctggccgactggaccagcttatctacatcccactgcct
gatgagaagtctcgcatttccattctcaaagcgaatctcaggaagtcgccaatctcaaag
gacgtggacgtggacttcttggccaagatgaccaatggcttttcaggtgctgatttgacc
gagatctgtcagagggcctgtaaactggccatccgtgagtccattgaaaatgagatcaga
cgggaacgcgagaggcagaccaacccttctgcaatggaagtggaggaggatgaccctgtg
cctgagattaggaaggaccattttgaggaggccatgcgctttgcccgccgctctgtcagt
gataacgacatccgcaaatatgagatgttcgcacagaccctgcagcaaagcagaggcttt
ggcagtttcagattcccatccagtaaccaaggtggaagtggaccaagtcagagctcctct
ggtggtggcggaggcacagtcttcaatgaggacaacgatgatgatctttatggataa
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