Pimephales promelas (fathead minnow): 120471237
Help
Entry
120471237 CDS
T08155
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120471237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120471237
Transporters [BR:
pprm02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
120471237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
DUF6077
DUF8068
Motif
Other DBs
NCBI-GeneID:
120471237
NCBI-ProteinID:
XP_039516955
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MEDPYRERTSLAKGARDIAKEAKRHAVKKVSKVVDRASDEYASGRNYSRFENDEDEGVNE
DGFNYQDGGARRDEDEGSSDATEGHDDEDEIYEGEYQGVPAGGGASGGRGQLTADGVKDK
RELEKEREADEEELAQQYELIIQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVLPSAE
TDMCVPNSGAGWLGSVVYLGMMVGAFFWGGLSDKVGRRQCLLVCMSVNGFFAFLSSFVQG
YGTFLFCRMLSGFGIGGAVPIVFSYFAECLAREKRGEHLSWLCMFWMVGGIYASAMAWAI
IPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFYLQMGKHDEAWMVL
KQIHDTNMRARGEPEKVFTVNRIKIPKHLDELVEMQSESANPVLKVLFRIKCELHGIWLT
FMKCWDYPIRDNTVKLAIVWFSLSFGFYGLSVWFPDVIKHLQADEYASRVKIHNNERTED
FTFNFTLENQIHKNGVFINDRFIGMKFKAVTFIDSSFQSCYFEDVSSIGSVFRNCTIIDG
FFYNTDIDDSKFIDSSVINSTFAHNKTGCQMTFDDDYSAYWVYFINFLGTLAVLPGNIVS
ALLMDKVGRLSMLGGSMVLSGISCFFLWFGTSESMMIAMLCLYNGLSISAWNSLDVVTAE
LYPTDRRGTGFGFCNAMCKLAAVLGNVIFGSLVGITKSIPILLASTVLVGGGLVGLRLPD
TRSNVLM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccatacagagaaaggacgtctctggccaaaggcgctcgcgacatcgccaaa
gaggcgaaacggcacgccgtaaagaaggtcagtaaagtggtggaccgagcctcggacgag
tacgcctcgggacgcaactacagccgcttcgagaacgacgaagacgagggtgtgaacgaa
gacggtttcaactatcaggacggtggagctcggcgagacgaggacgagggctccagtgac
gccaccgaaggccacgacgacgaggacgagatctacgagggcgagtaccagggtgtgccg
gcggggggcggggcttcaggggggcggggccagctgacagcagatggagtgaaggataaa
cgagagctggagaaggagagagaggcggatgaggaggagctggcgcagcagtacgagctc
atcatccaggagtgtggacacgggcgcttccagtggcagctgttcttcgtgctgggcctg
gcgctcatgtctgacggcgtggaggtgttcgtcgtgggcttcgtgctgcccagcgccgag
accgacatgtgtgtgccgaactcaggagccgggtggctgggcagtgtggtgtatctggga
atgatggtgggagcgttcttctggggcggtctgtcagataaggtgggccgacggcagtgt
ctgctggtgtgtatgtcagtcaacggcttcttcgccttcctctcatccttcgttcaggga
tacggcaccttcctcttctgcaggatgctctcgggattcgggattggcggggcggttccc
atcgtgttctcgtactttgcggagtgtctggcccgtgagaagcgcggggaacacctgagc
tggctctgcatgttctggatggtgggcgggatctacgcctcggccatggcctgggccatt
ataccacactatggctggagcttcagtatgggttcagcgtatcagttccacagttggcgt
gtgtttgtggtggtctgcgcgctgccctgtgtctctgcagtcgttgcgctcacgttcatg
ccggagagtccacgcttctacctgcagatgggaaaacatgacgaggcgtggatggtgctc
aaacagattcatgacactaacatgcgtgcgcgtggagagccggagaaagtcttcactgtg
aaccggatcaagatcccgaaacacctggatgagctggtggagatgcagtcggagtcggca
aaccccgtgctcaaagtcttattccggatcaagtgtgaactgcacggaatctggctcacg
ttcatgaagtgctgggattaccccatcagggacaacactgtgaagttggccatcgtgtgg
ttctcgctgtcgtttggtttctacggtctgtctgtctggttccctgacgtcatcaagcac
cttcaggcggatgaatacgcttcccgcgtgaagatccacaacaacgagagaaccgaagat
ttcacctttaatttcacgctggagaaccagatccataaaaacggagtgtttatcaacgac
aggtttattgggatgaagtttaaggcggtgactttcatcgactccagctttcagagctgt
tattttgaggacgtcagctccatcgggtccgtcttcagaaactgcaccatcatagacggc
ttcttctataacacagatatcgacgactcaaaattcatcgactcctctgtgatcaactcc
acgtttgcgcacaacaagaccggctgtcagatgacgtttgatgacgactacagcgcgtac
tgggtgtatttcatcaacttcctgggaacactggccgtgttgcctggcaacatcgtctcc
gccctcctcatggataaagtgggccgtttgagcatgttaggtggctcgatggtgttgtcc
ggcatcagttgtttcttcctgtggttcggcaccagtgagtccatgatgatcgcgatgctc
tgcctttataacggactcagtatatcagcctggaactcactggacgtggtgacggccgaa
ctctatcccaccgacaggagaggaactggattcggcttctgtaatgccatgtgtaaactg
gccgccgtcttggggaatgtaatatttggttcgttggtgggaatcacgaaatcgatcccg
atcctgttggcgtcgactgtgctggtcggcggaggcctggtgggtctgagactacccgac
acccgctccaacgtcctcatgtga
DBGET
integrated database retrieval system
