Pimephales promelas (fathead minnow): 120471241
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Entry
120471241 CDS
T08155
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120471241 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120471241 (rapgef1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
120471241
NCBI-ProteinID:
XP_039516958
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MFALLFYSEKPNPHNMLTDEMIAQGGEIDRESIRFKHRRNKHSHFNPTKTMDEESQKSHL
SSFTMKLMKFHSPKIKRTPSKKSKQLQPEPAVKTPEKPVNKKVSRLEEQEKEVVSALRYF
KTIVDKMSVDTKVLQMLPGSASKVLEAILPLMQVEARIQHSSAMSSCHNRVYQSLANLIR
WSDQVMLEGIDLDDKDTVATVTTVIKGVLDGVKELVKLTIEKHEQPSPTSPNKPAPPVTK
AESVCENPLTEREKAILSKTTPIATPTDSLTDMSEEEAPPKPPLPGLKLAEHSPPALPPK
KRQSASSPTRVAVVAPMSRGSCGHNLPPGALRQQQEFDVDLLQRRFSGGSQSYGGDSPRL
SPCNSMGKLSKSDEQLSSLERDSGQCSRNTSCETLEGYDPDYDFLHQDLSVSDPLPFPTA
TVSNLSPLPESHGESQSLSPAQAPPTHPRFSAPITNQASLEYWTPPLTPGQTNMVHPPAL
PQKKRRSAPILSAYPLYERLPSHYDNLSEEEQPTPPFPLVTPGSPLPQVNGGDELSQYTD
ADSPPPLPEKKGKQILQYMQFVEDYSEPQPSVFYQTPQSESIYEQRRNKRFQEVYGFNES
YSSSDSVHEAIPPPALPPKQRQLASYTSPPSSSSSSFSILPPPAGLLEEAEPALGLSLSV
SNSFLSGHASLTTPVSQSSDPIGLTNAGRALDGGGVSNGSLTSSLVSLAVCLPSESSLSD
SLLTSASESVDEGGEGEYVNLYSSTQANGDNTHRTDTSSCDDGLQDHTPHIPTSNSKEAL
SKDRPKEPSHGQIDDVDELSLIDHNDIMDRITLKAENDDGPDVRAGSGDILLVHATETDR
KDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDEL
CLVELTEDILRQLMDLVFRLVCNGELSLARVLRKNILDKVEQKRLLRHVHTLKPLAARGV
SARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNM
SYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQ
TSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNF
SKRWQQFNILDSMRRFQQVHYELKRNEDIVSFFNDFSDHLAEEALWELSLKIKPRNISRR
RTEREEKT
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcttctcttttacagcgagaaacccaacccacacaacatgctcacagacgag
atgattgctcagggcggagagatagacagagagagtatcagattcaaacaccgcaggaac
aaacactctcatttcaatcccaccaagaccatggacgaagaatcccagaagtcccacctc
tcatctttcacgatgaaattgatgaaatttcattccccgaagattaaaagaactccatct
aagaaaagcaaacaactccagccagagcctgcagtgaagactccagagaaacccgtcaac
aagaaggtgagtcgattggaggaacaggagaaggaggtggtgagcgctctgcgttacttc
aagacgattgtggacaagatgagcgtcgatacaaaagttctccagatgcttcctggttca
gctagtaaagttttggaggccatattgcctctgatgcaggtagaggctcggatacagcac
agctcggcaatgtcctcctgtcataaccgcgtgtatcagagtttggcgaatctcattcgt
tggtccgaccaggtgatgctggagggcatcgacctcgacgacaaggacaccgtggcaacc
gtcaccacggtgatcaaaggcgtgctggatggtgtgaaggagctggtgaaactcacaata
gagaagcatgagcaaccgtccccgacgtcccccaacaaaccagcgcctcctgtgaccaaa
gccgagagtgtgtgtgaaaatcctctaactgagcgagagaaggcgatcctgagtaagacc
acgcccattgccacgcccaccgacagcttgacggacatgtccgaggaagaggctccgccc
aaacctcctctaccgggactcaaactggcagagcacagcccgcccgctctgcctcccaag
aagcgacagtcggcctcctcccccacgcgtgttgccgtggtagcgccgatgagtcgagga
tcatgtggtcacaacttgcctcctggagccctgagacagcagcaggagtttgatgtggat
ctcctccagaggcgtttctccggcgggagccagtcgtacggtggagattcgccccgtctc
tctccctgtaacagtatgggaaagctcagcaagtccgacgagcagctctcttcactggag
cgagacagtgggcagtgctctcgcaacactagctgtgaaacactagagggatacgatcct
gattacgacttcctacatcaggatctgtccgtatccgaccccttaccgtttcccaccgcc
actgtcagcaatctgagccctctcccagaaagccacggggagtctcagtcattaagcccc
gcccaggccccgcccacccacccgcgtttcagtgctcccatcaccaatcaggcttccctg
gagtactggactccgcccctcacacctggacagaccaatatggtgcatccacccgccctc
ccccagaagaagcgacgatccgcacccatcttatcggcgtaccctctttacgagcgcctc
ccatcgcattacgataacctatcagaagaggagcagcccacgccaccgttcccgctggtg
acaccagggtcgccccttcctcaggtcaacggtggagacgaactctcacagtacacagac
gccgacagcccgccgccgctaccagagaagaagggcaaacagattctgcagtacatgcag
tttgtggaggattattcggaaccgcagccgtccgtcttctaccagacgcctcagagcgag
agtatttacgagcagcggaggaacaagcgctttcaggaggtttacggcttcaacgaatcc
tacagcagctcagactctgtgcatgaggccatcccaccgccagcgctgccgcccaaacag
agacaactggcctcctatacctctcctccttcatcctcctcttcctctttttcaattctc
cctcctcctgctgggcttctggaggaggcggagcctgctcttggtctcagcctatcagtg
tctaactccttcctcagtggccacgcctctttgaccacgcctgtgtcgcagagttctgac
ccgattggcttgaccaatgccggcagagctctagatggtgggggtgtctctaacgggtcc
ttgaccagctctctggtctctctggccgtctgtcttccttctgagtcttctctttctgac
tcgcttcttacctctgcgagtgaaagtgttgatgaaggtggcgagggagagtatgtgaac
ctgtactcgtccacacaggctaacggagacaacacacaccgcactgacacgtcttcatgt
gatgatgggcttcaagaccacacccctcacatacccacgtccaatagcaaggaagcattg
tccaaggacaggccgaaagaaccaagtcatggtcagatagatgatgttgatgaattatcc
ctcattgatcataatgacattatggaccgcatcacactcaaagcagagaatgatgatggt
cctgatgtgagagccggttctggtgatatactgttagttcacgctacagaaacagaccgc
aaagatttggtgttgtactgtgaggcttttctcaccacctacagaaccttcataacaccc
gaagacctcattaaaaaacttcactacagatacacacgcttctgtcacagtccagacacc
ttcaagaagcgtgtcagtaaaaacacgttcttcgtgctggtgagagtcgtggatgaactc
tgtctggtggagttgaccgaggacatcctgcggcagttgatggatctggtgtttcggctg
gtctgtaacggggaactgagtctagcgagggtcctgcgaaagaacatcctagataaagtg
gagcagaagaggctcctgcggcacgtgcacacgctcaagcctctcgccgcacggggcgtc
tctgctaggcccggcacgctgcacgatttccgcagtcatgagatcgccgatcagctgacg
ttgctggatgcagaacttttctacaagatcgagattcctgaggtgctgctttgggcaaag
gaacagaatgaagagaaaagcccaaatctgacccagtttacagagcactttaacaacatg
agctactgggtgcgctctataatcatccagcaggagaaagctcaggacagagagaaactg
ctgctcaaattcatcaaaatcatgaagcacttgcggaaactgaataacttcaactcttat
ttggcgattctctcggcgctggactctgcaccaatcagacgcctggaatggcagaagcaa
acgtctgagggcttggaggagtactgcactttgattgacagctcgtcatctttccgagcg
tacagagcagctctagccgaagtggagcctccatgcattccctacctgggtttgatccta
caggacctgacgtttgttcacctcggaaacccggattttattgagggtaaagtgaatttt
tccaagcgctggcagcagttcaacattctggacagcatgagacgcttccagcaagtacac
tacgagctgaaacgtaacgaagacatcgtctcgttcttcaacgacttcagcgatcacctg
gcggaggaggcgttatgggaactctcgctcaagatcaaaccacgaaacatctcgcggcgc
cggacagagcgtgaggagaagacctag
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integrated database retrieval system
