Pimephales promelas (fathead minnow): 120471254
Help
Entry
120471254 CDS
T08155
Symbol
lrrc8aa
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Aa
KO
K22038
volume-regulated anion channel
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120471254 (lrrc8aa)
Ion channels [BR:
pprm04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
120471254 (lrrc8aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
120471254
NCBI-ProteinID:
XP_039516974
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MIPITELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNQTCEQLNVSLPLNPEPKGIQYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLLHTLIF
LACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPAGKMNGSMDKK
ASSLSDQDVEASVPMLQRTKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRIHVEE
GDIVHRLYIRQIIIKVIQFIIIFSYTMYYVHFITFSVTCTVDIERLTGYRTYHCAHPLAT
LFKILACFYISLVVVYGLICMYTLSWIISRSLKRYSFESIREESSYSDIPDVKNDFAFML
HMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFMLS
GIPDTVFDLVELEVLKLELIPDVTIPPIIAQLCNLREMWLYHTPAKIEAPALAFLRENLK
SLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSADNNRFIVIDGLRELKRLKVLRLKSNLT
KLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMVNLTEMELVRCDLERIPHSIFSLHNL
QEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLTNLERLYLNRNKIEK
IPAQLFFCRKLRYLDLSHNNLTSIPPDIGFLQNLQYFAVTANRIETLPPELFQCKKLRTL
NLGNNCLTVLPSRFGELTGLTQLELRGNRLEGLPVELSECRLLKRSGLIVEEDLFNTLPP
EVKEQLWRADKEQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatcactgagctgcgatactttgctgacacacagccggcgtatcgaattctg
aaaccatggtgggacgtgttcacagactacatctccatcgtcatgctgatgatcgcggtg
ttcggtggcacgctgcaggtcacgcaggacaagatgatttgcctgccatgcaaatgggtc
gtcaaccagacctgcgaacagctcaatgttagcctgccgctcaacccggagccgaaaggc
atccagtacgacctcgacaggcaccagtacaactatgtggacgctgtatgttacgagaac
aagctccactggttcgcaaagtacttcccgtatctggtgctgctgcacaccctgattttt
ctagcatgtagtaacttctggtttaagtttccacggaccagttcgaagctggagcatttc
gtgtccattctgttgaaatgcttcgactcaccgtggacgacgcgcgcgctgtctgagacg
gtggtggaggagagtgacccgaagccggctgggaagatgaacggctccatggataagaaa
gcctccagcttgagtgaccaggatgtggaagcgagcgtcccgatgctgcaaaggaccaag
tcccggatcgagcagggcatcgtggaccgttcggagacaggggtcttggataagaaggaa
ggggagcaggccaaggcactgtttgagaaggtgaagaagtttcgtatccacgtggaggag
ggcgacatcgttcaccgcctttacatacggcagataatcatcaaagtcatccagttcatc
attatcttcagctacaccatgtactacgttcacttcatcacgttcagcgtgacctgtacc
gtggacatcgagcgtctgacggggtatcgcacgtaccactgcgctcatcctctggccacg
ctttttaagatcctagcctgtttctacatcagtctggtggtggtttacggcctcatctgc
atgtacacgctgtcctggataatcagccgctcgctaaaacgttattctttcgagtccatt
cgcgaggagagcagctacagcgacatcccggacgtgaagaacgacttcgccttcatgctg
cacatgatcgaccagtacgacccgctgtactcgaagcggttcgccgtgttcctgtcggag
gtcagcgaaaacaaactgcgacagctgaacctgaataacgaatggactctggagaaactc
cgacagaggataacaaagaactcgcaggagaaactagagctgcacctcttcatgctgagc
gggatcccagacacagtgtttgaccttgtagaactggaggtgctgaaattagagctgatc
cctgacgttacgatcccgcccattatcgcacagctgtgtaacctgagagagatgtggctt
taccacacaccggccaaaatcgaggctcccgctctggccttcctccgtgagaacctcaaa
tcactacacataaagttcacagacattaaggagatcccgctgtggatctacagcctcaag
aacctcagcgagctccatctcactggaaacctcagcgccgataacaaccgattcatcgtc
atcgatggcctacgggagcttaagaggctcaaggtcctgcggctgaagagcaacctcact
aaactgcctcaggtggtgacggacgttggcgttcacttgcagaagctctccatcaataac
gaagggaccaaactgatggttctgaacagtctgaagaagatggtgaacctgacggagatg
gagctggtgcgctgtgatctggagaggatcccgcactccatattcagcctgcacaatcta
caggaaattgatctgaaggacaacaatttgaagaccatcgaggagatcatcagcttccag
cacctccacagactggtgtgcctcaaactctggtacaaccagatcgcctacatccccatc
cagatcggcaccctcaccaacctggagcgactctacctgaaccggaacaagatcgagaag
attcccgctcagctgttcttctgcaggaagctgcgatacctggacctcagccacaacaac
ctgaccagcatccctccagacatcggattcctacagaacctgcagtactttgcggtgaca
gcgaacagaatcgagacgttgccgcccgagttgttccagtgtaagaagctgcggacgctg
aatctaggaaataactgccttacggtgttgccgtcgcgtttcggagagttaacgggcctg
acgcagctggagctccgcgggaaccggcttgagggattaccggtggagctctccgaatgt
cgacttctcaagcgctccgggctgatcgtggaggaagatctcttcaacacgttaccaccg
gaggtcaaggagcagctgtggagagccgacaaagaacaagcctga
DBGET
integrated database retrieval system
