Pimephales promelas (fathead minnow): 120471314
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Entry
120471314 CDS
T08155
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120471314 (ncstn)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
120471314
NCBI-ProteinID:
XP_039517052
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MRKMEDLISINCVKLLITALFYTCVSCSSVEKKIYVELNDTVPCVRLLNATHQIGCQSSM
SGDTGVLHVLESEEDLDWILNTGPHPPYMIVMETAFFNRLVMLRMKNSSRVSGVAVIVSK
TGLADNFSPHTHCPNQNTGVYSADYGPELANCNNTVWNPLGNGLSYEDFSFPVFALKDEN
QTQVIRKCYEDHNLRVNGSAPQYPLCAMQLFSHMHAVTDTVTCMRRTDLQTRFSINPEVL
CDPLSDFNVWWSTRPLNNSAKGHKADESVVIAATRLDGRSFFWEEAPAAEGTVSGIVTLL
AAAHALQPVTQTAPPPRNIFFTFFQGEAFDYIGSSRMVYDMQRGEFVIDFDNVHSMLEIG
QVGLRRGRELWMHSDPVSLRNSSVKDEVSEMMKSMQSIATDLGLSLVEPPVTQPLPPSSL
QRFLRVRPIPGLVLADHQSSFVNRYYESVYDDAENLNISYPPNLSPDEQLVFQTEEAKSL
AEVATLAARSLYKQAGGNETNLNNITADPKIVAQLLYGFLIQKNNSWFRALLPPEVTKKG
ANSILSSGPPQFYIGVGPRNTGPVHSVTRFVQYIMANLTGSVTNLTESQCLNPESKDFSS
YFWVSGPLVNGSGEPFCVNASVRLAKAVSPAFDLMEYGSRDYSTWTESRWKSIRARVFLV
ASRELEMLTLGVGVAVLLLSLLVTYFISSKAELLFSSARETPTTTY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatggaagatttaatatcaataaactgcgttaaacttctgattaccgctttg
ttttacacgtgtgtgagctgcagttcagtggaaaagaagatctatgttgaactcaacgac
acggttccgtgtgtgcgactcctgaacgccacacatcagatcggctgccagtcgtcgatg
tcaggagacacaggagttctgcatgttctggagagcgaagaagatctggactggatcctc
aacactggacctcatcctccttacatgatcgtcatggagacggccttcttcaacaggttg
gtcatgttgagaatgaagaactcgtccagagtgtctggagtcgctgtgatcgtctccaaa
acaggccttgctgacaacttctcccctcacacacactgcccgaaccagaacacaggtgtg
tattctgcggattacgggcctgaactcgccaactgtaacaacaccgtctggaatcctctc
gggaacggactctcctatgaagacttctctttccctgtgttcgctctgaaagatgagaat
cagactcaggtcatccggaagtgttacgaggatcataacctgcgtgtgaacgggagcgct
cctcagtatccgctctgtgcgatgcagctgttctcacacatgcacgccgtgaccgacacc
gtgacgtgcatgaggcgcacggacctgcagacccgcttcagcatcaacccagaggttctg
tgtgaccccttgagtgatttcaacgtgtggtggtcgacccgacccctgaacaacagcgcc
aagggtcacaaggccgacgagagcgtcgtcatcgcagccacacggctcgacggcaggtcg
ttcttctgggaggaggctccagcggccgaaggaaccgtgtctgggatcgtcaccctattg
gctgccgctcatgcgcttcagcctgtcactcaaacggctccgccccctcgcaatatattc
ttcaccttctttcaaggggaagccttcgactacatcggcagctcgaggatggtgtacgac
atgcagaggggggagttcgtgatcgacttcgacaacgttcactccatgctggagatcggg
caggttggtctgcgccgtgggcgggaactttggatgcactctgaccccgtatcattaaga
aacagcagtgtgaaggacgaggtgtcagagatgatgaagagcatgcagtctatcgccact
gatctgggcctctcattggtcgagcctcctgtcactcagccgctcccgccctcatccctg
cagcgcttcctgcgagtccggccaatcccaggcctcgttctggcggatcatcagtcctcg
ttcgtcaacagatactacgagagtgtgtatgacgacgcagagaacctgaacatctcgtac
ccgcccaacctgagtccagacgagcagctggtgttccagacggaggaagccaagtctctg
gctgaagtcgccactctcgccgctcgctcgctgtacaagcaggcgggaggaaacgagaca
aacctgaacaacatcaccgctgaccccaagatcgtcgctcagctgctgtacgggttttta
atccagaagaacaacagctggtttcgggcgctgcttcctccagaggtcacgaagaaagga
gccaacagcatcttaagctccggtcctcctcagttctacatcggtgtgggtccgcgcaac
accggccccgtgcacagcgtgacccgcttcgtccagtacatcatggccaacctgaccggc
agcgtcaccaacctcaccgagagccagtgcctgaaccccgagagcaaggacttttcctcg
tatttctgggtgtcggggccgttggtgaacggcagcggagagccgttctgcgtgaatgcg
tcggtgcgtctggctaaagccgtgtctccggccttcgacctcatggagtacggctcccgg
gattactccacatggaccgagtctcgctggaagagcatccgagcgcgagtcttcctcgtg
gccagccgagaactcgagatgttaacactaggagtgggcgtggctgtgctgctgctgtct
ctattggtaacatacttcatcagctcgaaggcggagcttctgttcagctccgcccgtgaa
acgcccacaaccacctactga
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