Pimephales promelas (fathead minnow): 120471374
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Entry
120471374 CDS
T08155
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120471374 (fubp1)
03041 Spliceosome [BR:
pprm03041
]
120471374 (fubp1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120471374 (fubp1)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120471374 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Vigilin
KH_KhpA-B
FUBP_C
Motif
Other DBs
NCBI-GeneID:
120471374
NCBI-ProteinID:
XP_039517117
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MADYSNVAPPSSNSGAGMNDAFKDALQRARQIAAKIGGDGIPPSPSSNEFGYGGQKRPLE
DGDQPETKKVPPSDPFSSVMGGMGGPRSISEEYKVPDGMVGFIIGRGGEQISRIQQDSGC
KIQIAPDSGGMPERSVTLTGSPEAIQGAKRLLSEIVEKGRPSPAFHHNDGPGMSVQEIMV
PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVM
DLIRDQGFREQRGEYGSRAGGGGNGGGGGEGGLDVPVPRFAVGIVIGRNGEMIKKIQNDT
GVRIQFKPDDGTTPERIAQIMGPPDRAQHAADIITDLLRSVQAGGPPGHGGGRGRGRGQG
NWNMGGPPGGLQEFTFTVPSMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIK
IFTVRGSPQQIDYARQLVEEKIGGPVSPMGGPHGGPGPHGGPSHGPPGPQGPPAPMGPYN
PGPYGQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYSQYQQQP
QGPMTPTSAAPGTTQSNGQDLVSSGQGQPQQDYTKAWEEYYKKQGQAAPQAAAAAATTQP
GGQPDYSAAWAEYYRQQAAYYGQGAPQAMGAAPQAQQGQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggccgactattctaacgtggctccgccgtcctctaactccggtgcagggatgaacgat
gcttttaaagacgcccttcagagagccagacaaatagcggcaaaaataggaggtgatggt
atacccccctctccgtcctccaatgagtttggttatggaggacagaagagaccccttgaa
gatggagatcaaccagaaaccaagaaggttccaccaagcgatcctttttcatctgtaatg
ggaggcatgggtggcccaaggtctatatcagaagagtacaaggttcccgatggcatggtc
ggcttcatcattggaagaggaggagaacagatttcaagaatccagcaggactctggctgc
aaaatacagatcgctcctgacagtggtggcatgcctgagaggtcagtgacattaacaggc
tcacctgaagcaatccagggtgcaaagaggttactctcagagattgtagagaaaggcaga
ccttctccagcatttcaccacaatgatggacccgggatgtctgttcaggagattatggtc
ccagcctccaaagctggtctggtcattggaaaaggaggagaaacaatcaaacagttacag
gaacgtgctggagtcaaaatggtcatgattcaagatggaccccaaaacacaggtgctgat
aaaccgctcaggatctccggtgatccttttaaagttcagcaagctaaagacatggtgatg
gatctgatcagagatcagggtttccgggaacagagaggagaatatggttctagagctgga
ggtggtggtaatggtggcggtggtggagaaggtggtctggatgttcctgtgccaaggttt
gcagtgggaattgtgattggcaggaatggtgaaatgatcaagaagattcagaatgatact
ggtgttaggattcagttcaaaccagatgatggcactactccagagaggattgctcagatt
atggggcctccagacagggctcagcatgcagcggatataataactgaccttctgagaagt
gtgcaggcagggggcccccctggtcacggtgggggcagagggagaggccgtgggcaggga
aactggaacatgggtggccctcctggaggcctgcaagaattcactttcactgtgccttcc
atgaagaccggcctcattattggcaaagggggtgaaacaattaagaacatcagccagcag
tccggagccaggatagaattacaaagaaaccctccgcctaattcagaccctaatataaag
atcttcacagtccgtggatcaccccaacagattgattatgccaggcaactggttgaggaa
aaaattggaggtccagttagccctatgggtggccctcatggtggtcccgggccccatgga
ggtccttctcatggtcctcctggtccacaaggacctcctgctcccatgggcccatataac
cctgggccctatggccagggccctcctggaccacatggtcccccagctccataccagcct
caaggctggggcaacggatacccccactggcagcaagggcagccagatcccaataaagca
gcagctgatgctaatgctgctgcatgggcagcctattattctcagtaccagcagcagccc
cagggccccatgacacccacctcagcagccccaggcacaacccagtccaatggacaagat
cttgtgtcttcaggtcaaggacaacctcagcaggactacacgaaggcatgggaagagtac
tataagaaacaaggtcaagctgctcctcaggcggctgcagcagcggcgacgactcagccg
ggaggtcagccggattacagtgcagcgtgggcagagtactaccgccaacaggcagcgtac
tacggccaaggcgcccctcaggcgatgggagctgcaccccaggctcagcagggccagtaa
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integrated database retrieval system
