Pimephales promelas (fathead minnow): 120471376 Help Entry 120471376         CDS       T08155                                  Symbol rc3h1b Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pprm03000]     120471376 (rc3h1b)    04121 Ubiquitin system [BR:pprm04121]     120471376 (rc3h1b) Transcription factors [BR:pprm03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     120471376 (rc3h1b) Ubiquitin system [BR:pprm04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120471376 (rc3h1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 DUF2570 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  120471376 NCBI-ProteinID:  XP_039517120 LinkDB All DBs Position Unknown AA seq 1106 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTD IEQLPVNSALLQLVGGQVPKQQPVALIACPEDTKHYDEARQCVEELALYLKPLSSARGVG LSNAAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADTQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARVPCTPGLLPEEGIPLEPGRKALTN GIVAGPGTPLPQLIPRGTDPSTYELLLKPKMDGSSHSAPGSPPDSLDASGLSLTPHPVSH HRAEHLPMPKQVQVVPRGAPQMYPQQQPELFYPEPARPASGSQYDTQYPAGNPYPYQPQY VSPRYIRNPPPPGESAVPPYTEPYPGYGPESQYQGHHSGPPFSAHTYGPPPHYSRRHGHY PAPPPPFAPPRDDLVRMSPVPLDVPPTAMPPPPSGAAGSLYHPQETSSRDRYPPDGYYPA GPHHSQMRSHIRDPYSRPQPSLDDLHRRRKELLVQLEERKVISPPPFAASPTPTHPFPND YPQEYLQDGSKAFGSREPDYAGQYSPWSCDTIGSYIGSKDAKPKDVSNAVEMMNAEGKVL REPPLDTQRRSAEAKDDDPIIPFGPLPTVSPFGAISRTSKTGYQTTGPVQAMASSQVSGS KHMTAEYPYGSHSGWGGTSYPQHQSINSQGHFSERLPMSAPDREQLKIELQQVNQQISQQ TRGMEAASNSMLLQREACALASQPAAGVKWSSGGTVSSEQLSLELHHVEREIGKRTREIA IENQVAHEYKLKATENGQPDHKAQLEELSLALGEVSNGSSGMKPASSMGGSMLSLANKTS SLSLCSADQAASSSDLQKNGVVHSCS NT seq 3321 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacagagtttttactgtgccccatatgcacccagacg ttcgaggagacagtgcgtcggcccatcagtctgggttgcggccacactgtttgcaagatg tgcctcaacaagcttcatcgcaaggcctgtccctttgaccagacggccatcaacaccgac atcgagcagctgcccgtcaactcggcccttctgcagctggttgggggtcaggtgcccaaa cagcaacctgtggcactcattgcgtgcccagaggacaccaagcattatgatgaggctcgg cagtgcgttgaggagttggccctctacctcaaacctctcagcagtgcacgaggagtgggg ttgagtaatgctgctcagagcatgctgagccgccccatgcagaggaagctggtgactctg gtgcactgtcagctggtggaagaggaaggacgggtcagggccatgcgggcggcccgctct ctgggcgaaagaacagttacggagctcattttgcagcaccaaaacccccagcagctctcc tccaacctgtgggctgccgtgagagccagaggttgccagttcctgggccccgccatgcag gaggaggcactaaagctggtgctgttggctttggaagacggatccgctctttctaggaag gttctggtcctctttgtggtccagagacttgaaccgagatttcctcaggcctccaaaacc agtattggacatgtagttcagctcctctaccgtgcctcctgcttcaaggtgactaagaga gatgaggattcatcgctaatgcagttgaaagaggagttccgcacgtacgaggcacttcgg cgggaacacgactctcaaatagttcaaatcgcgatggagggagggctccgcatcgcccct gatcagtggtcctctctgctgtatggagatcagtctcataagtcacacatgcagtccatc atcgacaagctgcagaccccagcgtcttttgctcagagcgtccaggagctgaccatcgca ctgcagaggacgggggaccctgccaatctcaaccggctcagacctcacctcgagttgctc gctaacatcgaccccagtccagatgctcctcctcccacctgggagcagctggagaagggg ctggtggcggtaaagacggtggtgcacggcctagtggacttcatccagaaccacagcaaa aagggtgctgacacgcagcagcctccccagcacagcaaatacaagacatacatgtgcaga gatatgaagcagaaaggaggctgtcccagaggagctagctgcacattcgctcattctcag gaggagctggaaaagtaccgtaaaatgaacaaacgtcttgctgcgcgagtgccctgcacc cctggcctgcttcctgaggaggggatcccactggagcctgggcgaaaggcccttaccaac ggcattgttgctggtcctgggacgcctcttccccagctcatccccagaggcacagacccc tccacatatgagctcttactcaagcccaagatggatggctctagccacagtgctcctggg tcgccacctgactctttggatgcatctggcttgtccctgacaccccaccctgtgtctcac cacagggcggagcacttacccatgcccaagcaggtgcaagtcgtgcccagaggtgcgcca cagatgtatccgcaacagcagcccgagctcttctatccagagccagccagacctgcctcg ggatctcagtatgacactcagtacccagcaggcaacccctacccataccaaccacagtat gtctctccccgctacatccgcaacccgcctcccccgggcgagtctgcagtgccaccttac acagagccctacccaggttacggcccagaaagccaataccagggccaccactctggtccc cctttctcagcccacacctatggaccgcccccccattacagtcgcagacacggacactat cccgcacccccgcctccgtttgcccctcccagagacgacttggtcaggatgagtcccgtt cccttggacgttcccccgactgctatgcctccacctccatcaggagctgcgggctctctg taccacccccaggagacctcatccagagacagatacccaccggacgggtattatcctgct ggaccgcatcacagccaaatgaggtcccacataagagatccatacagccgccctcagccc agtctggatgacttgcaccgcaggcgcaaggagctgcttgtccagctggaagagagaaaa gtcatctcccctccccccttcgctgcctcccccactcctacacacccgttccccaacgac taccctcaggagtatttgcaggacggctctaaagcctttggaagtcgggagccggactat gctgggcagtattccccgtggtcgtgtgacaccataggatcatacattggctccaaggat gctaaaccaaaagatgtcagtaatgccgtggagatgatgaatgcagagggaaaagttctg cgtgaacctccactggacacccagcggcgctccgcggaagccaaagacgacgatcccatc attccctttggtcctctgcccacagtgtctccttttggtgccatttcacgtacctctaaa acgggttaccagaccactgggcctgtacaggccatggcgtcctcacaggtctcgggctcc aaacacatgacagcagaatatccgtatggaagccacagcggatggggcggaacgtcgtat cctcagcaccagagcatcaactctcagggacacttcagcgagcgtctgcccatgtctgcc cctgaccgcgagcagctgaagattgagctccagcaagtcaaccaacagatcagtcagcag acccgcgggatggaggctgccagtaactccatgctcctgcagagggaggcatgcgcgctg gcgtctcagcccgcggccggagtgaagtggtcttcaggtggcaccgtgtccagtgagcag ctcagcctggagcttcatcacgtagagagagagatcggaaagagaacccgagaaattgcc attgagaaccaggtggcccatgagtacaagctgaaggccacagagaacgggcagcctgac cataaagcccagctggaggaactctctttagcactgggcgaggtgtctaatggatccagt ggcatgaagccagcaagcagtatgggtggatctatgctctcgctggccaataagacgtcg tctctctccctctgctccgctgaccaagcggcgagtagctcagaccttcaaaagaacggg gtcgttcactcttgctcttaa

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