Pimephales promelas (fathead minnow): 120471564
Help
Entry
120471564 CDS
T08155
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
pprm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120471564 (eme1)
03460 Fanconi anemia pathway
120471564 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120471564 (eme1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120471564 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
AHH
Motif
Other DBs
NCBI-GeneID:
120471564
NCBI-ProteinID:
XP_039517358
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MTCISRPGFLLSDSDSSDLEELPVFDFSQSKSRQANLVVLNSSDSEMAHVADPISALEVH
ASTGPARSDVLMVSSDSEVEEAIIPLAVRLKQKQLGLGTVATAAEETQAFNMDPNGYSHL
LDVPAHHIIPEAHLAEHNKICRDMTRQCSSNIAAPYLTKEPSAKADNGAYLAKRKKTPVE
VEAARQEALRKRATREHQQEEKERLRMEKKALADAVKALRPEECIKHMVVTVDPGLLQLE
GGGALLTSLHAMGCNCAIEKQSLPRSVTWARHSPCPQTGEIMSIPESHTVIQVPVDDFVT
MINNYCKRQSNSMTESGISLTTWIQGLMSRNPGRTLSLVVIDIEKYFRSQNSKCQKKFRE
AVLGEEKNVGLQGGQKKRRKKDDINQLPEVSRVQVEENLVDLQLQTGVQVRFLSSWKDFT
DYITMSTKAVAEAPFKREREKTGFTFCLESEWAGGQKVDRTGNGLLQVWKRQIQQLNRVS
PDMASAILSAYPSPRLLAQAYARCKSEHEKVGLLSDVLIRRGEGVTSTTRRVGPELSKRL
FLMMTSHDDQQPLDSAV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcatcagtagacctggattcctcttaagtgacagcgactccagtgatttagaa
gagctacctgtgtttgatttctcacagtcaaaatctagacaggccaacttggtggtttta
aacagttccgactcagaaatggctcatgttgctgatccaatttcagcactagaggtccac
gcctccactggacctgctagaagtgacgtgttgatggtcagtagtgacagcgaagtggag
gaggccatcattcccttagctgtgagactgaaacagaaacaacttggtctgggtacagta
gccactgctgcagaggagactcaggcttttaatatggatcctaatggatattcacacctc
ttagatgttccagcacatcatatcatccccgaggcccacctagctgaacataacaagatc
tgtagagatatgacaaggcagtgtagctcaaacattgctgcaccataccttacaaaagaa
ccttctgctaaagcagataatggcgcttacctggccaaacgcaagaaaaccccagtagaa
gtggaggctgccagacaggaagccctgaggaaacgagcaacgcgagagcatcagcaggaa
gagaaggagagattgagaatggagaagaaagctctggctgatgctgtgaaagccctgagg
ccagaggagtgcatcaaacacatggtagtgacggtcgacccaggcctgctgcagctggaa
ggtggcggtgctctcctgacttctctgcacgcaatgggctgcaactgtgcaatagagaag
cagtctcttcctcgtagtgtcacctgggctagacactcaccttgccctcagactggtgag
attatgtctattccagaatcacatactgtaatccaagttccagtggatgactttgtgacc
atgattaacaactactgcaagaggcaaagcaacagtatgaccgaaagcggcatatctctg
accacctggatccaaggacttatgagcagaaacccaggcagaaccctcagtctggtcgtg
attgacatagagaagtacttcagatcccagaattcaaaatgtcagaagaaattccgtgag
gcagtgctaggcgaggaaaagaatgtgggacttcagggagggcagaaaaagcgaagaaag
aaagacgatatcaatcagcttccagaggtctcacgagtgcaggttgaggagaatttggta
gacttgcagcttcaaactggtgtgcaggtccgcttcctctcttcctggaaggacttcact
gattatattaccatgtcaaccaaagcagtagccgaggctccgttcaagcgggagcgagag
aaaacgggcttcacattttgtttggagagtgagtgggcagggggtcagaaggtggaccgc
acagggaatggccttctgcaagtttggaagagacaaatacagcagttgaaccgtgtcagc
cctgatatggccagtgctatactcagtgcctacccgtctcctcggctccttgctcaggca
tatgcaaggtgcaaatcggagcatgaaaaagttggtctgctgtcagatgtgctcattcgt
cgcggagagggtgtgacatctacaactcgcagagttggtccagagctttctaaacggttg
tttcttatgatgacgtcacatgatgaccagcagccccttgattctgctgtatag
DBGET
integrated database retrieval system
