Pimephales promelas (fathead minnow): 120471694
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Entry
120471694 CDS
T08155
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120471694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120471694
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120471694
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120471694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
zf-C3HC4_3
Prok-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120471694
NCBI-ProteinID:
XP_039517528
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MRVPVRRWAGLWPWMLMAGLEVVLGQTGLELAAAVETERALIKVTLLKQESTSRPIITLE
GVFAGGSAGSARGKLMQSHPLSLCNTSEDERQEPDFISIVKLESPESNVPQCQPLLDKAR
LAIQRGAQAVIFDITDDPSAAVELRDSGSLPRPVLLVKSSDAEELMGLVNKNEEAMVYID
IMMDPPKWPHYDVGILLTVALAVLAIIMIFALRFRCRSNRTWDSVHQETMRAISRLETRT
YSSQGCSGSQRSGAAPASNSSSSSSPICAICLEEFMDGQDLRIISCAHEFHKECVDPWLL
QHRTCPLCMHNIMGKQPQGSDLASRQPQRSRLPPPPQEHSQAFLLPHHYSNQRPYPQHHV
PFSLRHHYPRTPGHLPQLGHYGNSPPPHPRTLRCFPNRPLGASCAYHLAPDSHHGRTHRT
GGRGCRTGGHHYAPPRRSCQRCAGGALRNAAGSCVHHLASSVNHATHHLPRGGGSHGRQD
DGSCSGGSYHTECSGYLAEGPATDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRSSL
SSDYDPFVYYGPGKGPRRGSMEATQRPRSLDSVVNPAGDANAVCSEEKQQQQVAVFSHVH
YHRHRHHYYEDGDLGQGSDEDQGAVAAGGPCNATKNKDSTGCQVQHQTCHCPKTDLSSRR
VEDRAPDPVSSSGASVILPSPPLASPSLSCCHKGPGWTTRQKAAGCPLEAPSPVVHFHQS
LDLQDDCSIHIHYGQGAGSYCCTPPADMAPTLLPVPLILDSTGMSEWPCCSGAHVVWQKQ
VQQAHSEPQLLGPTSETDRPLCRAHHGPGDELPTDICLYCQTLHNSQGSEEESGV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgctgggccgggctctggccgtggatgctcatggctggcctg
gaggtggtgttgggccaaacgggcctggaactggccgctgccgtggagaccgaacgagcc
ctgatcaaggtgaccctgctgaagcaggagtccaccagcaggcccatcatcaccctggag
ggggtgttcgccgggggcagcgcaggcagtgccagagggaaactcatgcagtctcacccg
ttgtctctgtgtaacaccagtgaagatgagcgtcaggaacccgatttcatcagcatcgtc
aaactcgagagtcccgagagcaacgtgccgcagtgccaacctctgctggataaagctcgc
ctggccattcagagaggagctcaggccgtcatctttgacatcactgatgatccatctgct
gctgtggagctgcgtgactccgggtcgttgcctcgtccagtgctgctggtgaagtcatca
gacgcagaagagctgatgggactcgtcaataagaacgaagaagccatggtgtatatcgac
atcatgatggaccctcctaaatggcctcactatgacgtcgggatcctgttgaccgtggct
ctggctgtgctggccatcatcatgatctttgctctacgcttccgctgcaggtccaacaga
acctgggactctgtgcaccaggagaccatgcgtgccatcagccggttggagacgcgcacg
tacagctctcagggttgctccggatcccagcgttcaggcgccgctccagcgtccaacagc
agctccagttccagccccatctgtgccatctgtcttgaggaattcatggatggccaggac
ttgagaatcatctcctgtgctcatgagtttcataaagagtgtgtcgacccctggctccta
caacaccgaacctgcccactgtgcatgcacaacatcatgggtaaacagcctcagggttca
gatctggcatcccgtcagccccaaagaagtcgactgccgccccctcctcaagagcacagt
caagccttcctccttccccatcactactcaaaccaacgcccttacccccaacatcacgtg
cccttttccctgcggcatcactacccccgcacccctggacatttaccccaattgggtcac
tatggaaactccccccctcctcatccacgcactctccgttgctttcccaacagaccattg
ggcgctagctgcgcgtaccaccttgccccggattcccatcatggacgtacgcacaggaca
ggcgggcgcgggtgtcggactggggggcatcactatgcgccccccagacggtcgtgtcaa
cggtgcgccggaggagcgttacgaaacgccgcaggttcttgtgtgcaccatttggcatcg
tcagtaaaccacgcgactcatcacctgccgcgtggcggaggctcgcacggtcgccaagat
gacggaagctgctccggagggagttaccacacggagtgcagcggttaccttgccgagggg
ccggccaccgactccagctcgggatcgtgccacggctcgtccagcgattccgtattaaac
tgtacggatatcagcctgcagggcgtctatggcagctggtccacttttcgtagctcgctc
agcagcgactatgacccgttcgtctattacgggccgggaaaagggccacgcagagggagc
atggaggccacgcagaggcctcgttccctggactctgtagtgaatcccgccggtgacgcc
aatgcggtttgctcagaagagaagcagcagcagcaagtggccgtgttcagtcacgttcac
tatcacaggcatagacaccactattacgaggacggggacctcggccaagggtctgacgag
gatcagggggccgtggcagctggtggcccctgtaatgcaactaaaaacaaagactccact
gggtgtcaggtacagcaccagacttgccactgccccaaaacggacctcagttcaaggagg
gttgaggatagagccccggaccctgtttcctcctcaggcgcctctgtgatccttccctcc
ccccctttagcctctccgtccctgtcctgttgccacaaaggcccagggtggaccaccaga
cagaaagcagccggctgtcccttggaagcgccttcgccggttgttcacttccaccaaagt
ttggaccttcaggatgattgtagcattcatatccactacggacagggagctggaagctac
tgctgcacacctccagcggatatggcccctacactgctgccggtgcccctgatcttggac
tcgactggtatgtccgaatggccgtgctgtagcggggcacatgtggtgtggcagaagcag
gtccaacaggcccattcggagcctcagcttttgggccccacttctgaaacggacagaccc
ttgtgtagggcccatcacggcccgggggacgaacttcctacggatatctgtctgtactgc
caaactctacacaatagtcaggggtcagaagaagagtctggtgtttga
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