KEGG   Pimephales promelas (fathead minnow): 120472046
Entry
120472046         CDS       T08155                                 
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120472046 (tia1)
   03041 Spliceosome [BR:pprm03041]
    120472046 (tia1)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     120472046 (tia1)
Spliceosome [BR:pprm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    120472046 (tia1)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded Calcipressin RRM_Nup35 Nup35_RRM_2
Other DBs
NCBI-GeneID: 120472046
NCBI-ProteinID: XP_039517977
LinkDB
Position
Unknown
AA seq 407 aa
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDHLDTSRGVNPHLPHDSVM
IPRTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVF
VGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGG
QWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQL
MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHLVKCYWGKETTD
MVTPMQQVQVPQQNKVGFAAQPYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQG
FNHLQAGAGWTGVSAVSNGGVVESAQGVNGTVLANQSSMGTAGYHTH
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgatggacgacgagcagcccaagaccctgtatgttggaaacctgtcacgggatgtgacc
gaagcccttattatgcagctctttggtcagattggcccctgtaagagctgtaaaatgatt
gtggatcatctcgatactagtagaggtgtgaatcctcacttgcctcatgattcggttatg
attccaaggacggcaggtaacgatccatactgctttgtggagttcttcgagcataggcac
gcagcggcctcactcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtg
aactgggctacatcaccaagcagccagaaaaaagacacaagcaatcacttccacgtcttt
gttggagacctcagtccagaaatcaccactgatgatatcagagctgcctttgcacccttt
gggaggatatcagatgcacgtgtagtgaaagacatggcgacggggaagtcaaaaggctat
ggttttgtttcattcttcaacaaatgggacgcagagaatgccattcagcagatgggagga
cagtggttgggcggcaggcaaatcaggactaactgggctacaagaaaacccccagcgcct
aaagccacctatgaaacaaacaccaagcacttgtcgttcgatgaggtagtgaaccagtcc
agccccagcaactgcacagtttattgtggtggagtcactacaggccttacagaacaactc
atgagacagaccttttccccctttggccaaataatggaaattagagtgttcccagacaaa
ggctactcgttcgtgaggttcaactctcatgaaagtgcagctcatgcgatagtgtctgtt
aatggtacgtccctagaaggtcatctagtgaaatgttactggggtaaagagactacagac
atggtgacccccatgcagcaggtgcaggtaccccagcagaacaaagttggtttcgccgca
cagccatacggccagtggggacagtggtacggaaacgcacaacaaattagtcagtatgtc
cctaacggctggcaggtacctacttacggcgtgtacggacaggcttggaatcaacaaggc
ttcaatcacttacaggctggcgctgggtggactggtgtgagtgccgtgagtaacggaggc
gtggtggagtctgcgcagggagtcaatggaaccgtgctagccaaccagtccagcatgggc
actgcaggataccacacacactga

DBGET integrated database retrieval system