Pimephales promelas (fathead minnow): 120472046
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Entry
120472046 CDS
T08155
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120472046 (tia1)
03041 Spliceosome [BR:
pprm03041
]
120472046 (tia1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120472046 (tia1)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120472046 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120472046
NCBI-ProteinID:
XP_039517977
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDHLDTSRGVNPHLPHDSVM
IPRTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVF
VGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGG
QWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQL
MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHLVKCYWGKETTD
MVTPMQQVQVPQQNKVGFAAQPYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQG
FNHLQAGAGWTGVSAVSNGGVVESAQGVNGTVLANQSSMGTAGYHTH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacctgtcacgggatgtgacc
gaagcccttattatgcagctctttggtcagattggcccctgtaagagctgtaaaatgatt
gtggatcatctcgatactagtagaggtgtgaatcctcacttgcctcatgattcggttatg
attccaaggacggcaggtaacgatccatactgctttgtggagttcttcgagcataggcac
gcagcggcctcactcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtg
aactgggctacatcaccaagcagccagaaaaaagacacaagcaatcacttccacgtcttt
gttggagacctcagtccagaaatcaccactgatgatatcagagctgcctttgcacccttt
gggaggatatcagatgcacgtgtagtgaaagacatggcgacggggaagtcaaaaggctat
ggttttgtttcattcttcaacaaatgggacgcagagaatgccattcagcagatgggagga
cagtggttgggcggcaggcaaatcaggactaactgggctacaagaaaacccccagcgcct
aaagccacctatgaaacaaacaccaagcacttgtcgttcgatgaggtagtgaaccagtcc
agccccagcaactgcacagtttattgtggtggagtcactacaggccttacagaacaactc
atgagacagaccttttccccctttggccaaataatggaaattagagtgttcccagacaaa
ggctactcgttcgtgaggttcaactctcatgaaagtgcagctcatgcgatagtgtctgtt
aatggtacgtccctagaaggtcatctagtgaaatgttactggggtaaagagactacagac
atggtgacccccatgcagcaggtgcaggtaccccagcagaacaaagttggtttcgccgca
cagccatacggccagtggggacagtggtacggaaacgcacaacaaattagtcagtatgtc
cctaacggctggcaggtacctacttacggcgtgtacggacaggcttggaatcaacaaggc
ttcaatcacttacaggctggcgctgggtggactggtgtgagtgccgtgagtaacggaggc
gtggtggagtctgcgcagggagtcaatggaaccgtgctagccaaccagtccagcatgggc
actgcaggataccacacacactga
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