Pimephales promelas (fathead minnow): 120472092
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Entry
120472092 CDS
T08155
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120472092 (ythdc1)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120472092 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
120472092
NCBI-ProteinID:
XP_039518063
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSVDRRDEKDGELNVLEDILTDAPDQDDELYNPESEHDVNEKKGSKRKHERGDSQDAKRL
RASGHTTRQQLKRAATSSGSNSKKTSNPRGRHAPEDIYDDRKNHAGRGSRADLPKGYSEK
GPSRSRDSQRRIKPLLPELTEKMRRTSEESTGRTSRSSREEEPHSDEYVTGSSVASSEGN
CSDVEEGAMQEEGEEKEVEEEEVDEEEEEEEEYELEEEDPQEGNEPNDYDTRSEASDSQS
ESVSFSEGESVHSASGSEASGSEKKHEKLSSSVRAVRKDQTSKLKYILREARFFLIKSNN
HENVSLAKAKGVWSTLPVNEKKLNAAFRAARSVVLIFSVRESGKFQGFARLSSESHHGGS
PIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNPWNEHKPVKIGRDGQEIEPDC
GTQLCMLFPPDESIDLYQVIHKMRHKRRMHSEPRSRGRLPHREPVPRDVGRRRPEEYDMH
NRKRPRIDYTPEFPQRPGFMQDPRNQPVDRRFTGVRRDVFLNGSYNDYMREFHHNIGPPP
PWQGMAPYPGMEHPPQHPYYQHHHHPPPPQAHPPYSGHHPMPHDARFREKRVVRSFASSL
HDYDMRVDDFLRRTQAVVSGRRSRPRERDRQRERDRPRDGRRDRERERGRERDRERERIR
DREREKERGRYRR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgacaggagagatgagaaagatggggaactgaatgtgctggaagacattttg
actgatgctcctgaccaggatgatgagctctacaaccctgagagtgaacatgatgttaat
gagaaaaaagggtctaaaaggaagcatgaacgaggagacagccaggatgcaaagcggctt
agagcctcaggacacactaccagacagcaactaaagagagctgcaacatcttctggctca
aacagcaaaaagacgagcaatcccagaggaagacacgcaccggaagacatctatgatgac
agaaagaaccatgctggaagaggatcccgggctgatctgcctaaaggctatagtgaaaaa
ggcccgtcccgcagcagagactcccagagacgaatcaaacccctgctgcctgaactgaca
gagaagatgcggaggaccagtgaggagagtacaggcagaacgagtcgctcgtccagagag
gaagagcctcattcagatgaatatgtgactggcagctctgtggcttcctctgaaggaaac
tgctctgatgtcgaagaaggagccatgcaggaggaaggggaagagaaggaagtggaggag
gaggaagtggatgaagaagaggaagaagaagaagagtatgaactggaggaagaggaccca
caggagggaaatgaaccgaatgactacgacactcgcagtgaggccagtgattcccagtct
gagtctgtgtccttctcggagggagagtccgtacattcagcctcgggctcagaagcgtca
gggtctgaaaagaaacatgaaaaactgtcctcttctgtcagagctgtgaggaaggatcaa
accagcaagctgaagtatatcctgagagaggccaggttttttcttattaagagcaacaac
catgagaatgtttccctggctaaagcaaagggtgtgtggtccactctgcccgtcaacgag
aaaaaactcaacgctgcttttcgcgctgctcgaagtgttgtgctaatcttctcagttagg
gagagtggaaagtttcaaggttttgctcgactctcgtccgagtctcatcatggaggttcc
cccattcactgggtcctgcccgcaggcatgaatgccaagatgcttggaggagtcttcaaa
attgactggatttgccggcgggaattacctttcacaaaaactgctcacctctccaacccg
tggaatgagcacaagcctgtgaagattggacgtgatggacaggagatcgaaccagactgc
gggacacagctgtgcatgctcttcccaccggatgagagcattgacttgtatcaggtcatt
cacaaaatgcgccacaagaggaggatgcactcagagcctcgatctcggggccgactaccc
cacagagagcccgtccctcgggacgtgggaaggcgtcgccctgaagaatatgacatgcac
aaccggaagcggcccaggattgattacactccagaattcccccagagaccaggttttatg
caagaccctcgcaatcagcctgtggacaggcgcttcactggtgtcaggagagatgtgttt
ctcaacggatcctataatgactacatgagagaattccaccacaacatcgggcctccacca
ccatggcagggaatggccccgtaccctggtatggagcaccctccccagcacccatactac
cagcatcatcatcatcctcctccaccgcaggcccaccctccgtactccggacaccatccc
atgccccatgatgcccgcttcagggaaaagagggttgttcgctctttcgcctccagtttg
catgactacgatatgcgtgtggacgatttcctgagacgaacacaggccgtggtgagcgga
cgcaggagtcgcccgcgcgagcgtgaccggcagagagagcgagaccggccccgggacggg
cgacgcgacagagagcgagagcgcggcagagaacgtgatcgcgaacgagagcggattcga
gatcgcgagagggaaaaggagaggggccgataccggagatag
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