Pimephales promelas (fathead minnow): 120472166
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Entry
120472166 CDS
T08155
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03030
DNA replication
pprm03410
Base excision repair
pprm03420
Nucleotide excision repair
pprm03430
Mismatch repair
pprm04110
Cell cycle
pprm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120472166 (pcna)
03410 Base excision repair
120472166 (pcna)
03420 Nucleotide excision repair
120472166 (pcna)
03430 Mismatch repair
120472166 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120472166 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
120472166 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120472166 (pcna)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120472166 (pcna)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120472166 (pcna)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120472166 (pcna)
MMR (mismatch excision repair)
Other MMR factors
120472166 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
120472166 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
120472166
NCBI-ProteinID:
XP_039518175
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADSLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSSVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEESS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcacgtctcgttcaaggatcaatccttaagaaggttctggaggctctgaaa
gacctcatcaccgaagcctgctgggatgtcagctcctcaggcatctctctgcagagcatg
gactcctctcatgtgtctctggtgcagctcacactccggagcgatgggttcgactcctac
cgctgcgacagaaacctggccatgggtgtcaatttgagcagcatgtcaaagattctgaag
tgtgctggaaatgaagatatcatcacgctcagggcagaagacaatgcagactctttggca
ctggtctttgaaacactcaatcaggagaaagtgtccgactatgagatgaaactgatggat
ctggatgtggagcagcttggcattccagagcaggaatacagttgcgtggtgaagatgccc
tctggtgaattcgccagaatctgcagggatctgtcgcaaattggcgatgccgtcatgatc
tcatgtgccaaggatggtgtgaagttttctgccagtggagagctgggtacaggcaatgtt
aagctttcacagaccagcagtgtcgacaaggaggatgaagcggtgacaattgagatgaat
gagccagtgcagcttatttttgcattgaactacctgaacttcttcaccaaggccactcct
ctgtccaagacagtcacactcagcatgtctgcagacattccactagtggttgagtacaag
attgctgacatgggacacgtcaaatactacctggcacccaagattgatgaagaatcctcc
taa
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integrated database retrieval system
