Pimephales promelas (fathead minnow): 120472235
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Entry
120472235 CDS
T08155
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120472235 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120472235 (taf6)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120472235 (taf6)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120472235 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
120472235 (taf6)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120472235 (taf6)
STAGA complex
120472235 (taf6)
TFTC complex
120472235 (taf6)
SAGA complex
120472235 (taf6)
SLIK complex
120472235 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
120472235
NCBI-ProteinID:
XP_039518256
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAEERRQKLCSVILPTESMKAMAESVGVGSLQEDSCLALSEEVSYRIKEIAQDALKFMHH
GKRRKLLTGDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGSIQS
KGQGATSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDDRTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGARIKAVMDGPVVSNIDKIGADHVQSLLLKH
CASVVAKTRPLPDLVDQYKADFGYLGTMLCSHVIKARAQASFQAQTVNRTTLTITQPRPT
LSMSQSGLSTSGSRTPSIIKVPSSLTLMSARPGTPTQPSPPATKYIVMATSAGAASTQQV
ITLSSSQSGSPVTSTVPSTPTSLQPLVKLESGNTGAVGGSRPLQKYIVVSLPSSSSSLEN
KGTGVLPSSTSPISMESTVKLERSESPAASTQSPH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgcagacagaagctgtgttcggtgatcctccctactgaatctatgaag
gcgatggcggagtcagtgggtgtgggctcactgcaggaagacagctgtctggccctcagc
gaagaggttagctacaggattaaagagattgcacaggatgcactaaagttcatgcaccat
gggaagagacgcaaacttctgactggtgacattgaccatgctcttaaactaaaaaacgtg
gagccgctatatggattccagtctcaagagttcatcccattccgctttgccagtggaggt
ggcagagaattgcatttttatgaagaaaaggaagtggatcttagtgacatcatcaacaca
cccctccctcgagttcctcttgatgtttcactcaaagctcactggttaagcattgatggt
gtccagcctgcaataccagagaacccacctccagcccctaaagagcagcagaaggcagag
tctacagagccactcaaagctgtcaaacctggacaggaagaggaaggctctatccagtcc
aagggtcagggtgcaacctctgctgaagtcaaaggaaaggagaagatgcggatgaagccg
cgtagcacacacgagctctctgtggaacagcaactgtattataaagagatcactgaagcc
tgtgtgggatcttgtgaagccaaaagagcggaggcactgcagagcatagcaacagaccct
ggcctgtaccagatgctgccaaggtttagtaccttcatctccgagggcgtgcgtgtaaat
gttgttcagaataacctggctttgctgatatacttgatgaggatggtgaaggctttaatg
gacaatcccacactatatttggagaaatatctccatgaattgatcccagcagtggtgacg
tgtattgtcagtaagcagttatgtttgaggcctgatgtggacaatcactgggctttgcga
gactttgctgctcggttgatggctcagagctgcaagacgttcagcacaaccaccaacaac
atccagtctcgtatcaccaagacctttactaaggcattgttagatgataggactcagtgg
acgactcgttatggctgcattgctggacttgctgaacttgggcatgacgtgataaagaca
ttgatcatccctcgcctgtctgtagagggtgctcgtattaaagctgtgatggatgggcca
gtggtatctaacattgataagattggagccgatcatgtccagagtctgttacttaaacat
tgtgcaagtgtggttgctaaaactaggccactaccagatttggtggatcaatacaaggca
gattttggctatctgggcaccatgctctgttcacatgtgatcaaggcccgtgcacaggct
tccttccaggcccaaactgttaacagaaccacacttactatcacacagccacggccaact
ctgtcaatgtctcagagtggattgtcaacgtcaggttcacgcacacccagcatcattaaa
gtacccagttcgctcaccctcatgtccgctcgccctggaacgcccactcagccatcacct
ccagcaaccaagtatattgttatggcaacaagtgcaggggctgcatccacacagcaggta
atcactctcagctcctcccagtctggatctcctgtcacaagtacagtccccagcaccccc
acatctttacagccactcgtcaaacttgagtctggaaacacaggtgctgtgggcggctca
cgccctctccagaaatacattgtggtgtctttgccttcatcctcttcctcactggagaac
aagggcacaggtgtccttccctcctctacctcacccattagcatggagtctactgtcaag
ctagaacgttcagaatcaccggccgcaagcacacaatcgccacattga
DBGET
integrated database retrieval system
