Pimephales promelas (fathead minnow): 120472358
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Entry
120472358 CDS
T08155
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120472358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprm03009
]
120472358
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120472358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
120472358
NCBI-ProteinID:
XP_039518450
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MEEPDNINIEEGMENKSAKQSKDPKRKANDTVSDGGVLRPLKLSKKELFKAPTVEELNQL
KEAENLFHCSILKMQMEELLKEVALSEHRKKLVDSFVQEVTDSLQSVPDSEVVELDDLSW
LPGVEVPFLFASLESKGKFHMEPPASIDVVGSYPLGTCIKPRVIVDLAVTIPASILHPMD
AINQRYPRKRALYLAGLAQHLCFSESVGSLCYSCLHGNRLRPVLLLKPTGKDSSKVTLRI
HAIPPPDFLKPSRFHPRKNNIKTEWFTGVANKQQESSGPATPHYNSTVLGDHLPLSHLQF
LSAISAQCPAFGDGVALLKVWMRQRELDQGAGCFCGFHASMLMAYLLSTHKVGKTMNAYQ
LFRNALHFLASTDLTESGITLARNPDSKAPSLQDFQAAFSVVFVDPSGHLNLLADMTAFT
YKQIQHEASLSLKFWDDPTVDSFQALLMTSKAMIRTYDNVFQLSGLVNLQASCKKLSLLN
ELMDHSGNYVLSALPFILSLLQRGLGERINLLVHSLPQDPEWPVDSSPPKHKDQPPLNIG
LMLNLEQALSVLERGPPADNPKADEFRQLWGSRSELRRFQDGSITEAVLWSGSSTCQRRF
ILLEIITHLLQLHADIPESCVRLVGGQLDDVIKISKEMGTTGEEESLKVVQSYDDLSRKL
WQLEGLPLSITSVQGAHQALRYTQVFPPVPVKLLYSFFDRKKNQLGLVPRKEKPCPCYIT
PIKVIVHLEGSGKWPSEHLAIRHIKAAFHISLGELLCKQHNYKCHATPAYLDVCKDGLAF
RIQVAYHREPQILRESLTPEGMLIYRENAEAQALELETQHKPFLTSTLHGLQQQLGCFGV
VCRLAKRWLASQFLLEYIQEEAADLLVASLFLHPAPFTPPSSPQVGFLRFLHLLSTFDWK
NNPLIVNLNGKLTAADHTDIKNDFVASRESLPTMFIATPTDKKLSVWTKKTPSVQMLQRA
VMLAAESLRVLETHLIDSSQKQDIRVAFRPPLEDYDVLIHLVPQQVPLLAKAVDPPAITF
QNGTFRGEPSASGGALPVIDYDPARLYLSELRDAFGDLALFFYDPFGGTVIGVLWKPTAF
KPQPFKTSLMNARRVEVNGDVATTVPNIEAILQDFRIIGEGLVKKLELRTEKWAV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccagataacattaatattgaagaaggaatggagaacaagagtgcaaaacaa
tctaaggatcccaagcgaaaggcaaatgacacagtctcggatggtggggtcttacggcct
ctcaaactgtccaaaaaggagctattcaaagcccccacagtggaagagctcaatcagctg
aaagaagcagaaaatctcttccactgtagcatattgaaaatgcagatggaagaactgctg
aaagaagtggcccttagtgagcacaggaagaagctggtggactcttttgtgcaggaggtt
acagattcactgcagtctgtgcctgattctgaagttgtggagttggatgatctttcatgg
ttgccaggtgtggaagtcccattcctcttcgcctcgctggaatcaaaaggcaaatttcac
atggagcctcctgcatcaattgatgtggtaggcagttatccactggggacctgtatcaaa
cccagagtcattgtggacttggctgtcactattccagcttctattttgcacccgatggat
gccattaaccagcggtacccacgaaagcgagcgctgtatttggctggcctagcgcagcac
ctctgcttctcagagtctgtgggttcactgtgctactcatgtctccatggcaaccggctt
cgcccagtcctacttctcaaacccacaggtaaagacagcagtaaggtcacgttgcggatt
catgccattcctcctccggacttccttaaacctagccgctttcatcctcggaaaaacaac
atcaagactgagtggtttacaggtgttgccaataagcagcaagagagcagtgggcccgct
actcctcattataacagcacagttcttggagatcatctcccactgtcacatcttcagttc
ctatcagccatcagcgcacagtgtcctgcttttggagatggtgtcgccctcctcaaagtg
tggatgagacagagagaactggaccagggtgcaggttgtttttgcggcttccacgcatca
atgttaatggcttatcttctatccacacacaaagtgggcaaaaccatgaatgcgtaccag
ctgttcaggaatgcactgcacttcttggcttccacagatctgacagagagcgggatcacc
ttggctagaaacccagactcaaaagcgccctcactgcaggacttccaggcagcattctcc
gtggtctttgtggacccgtctgggcatctcaatctgcttgcagacatgacagcttttacc
tacaaacagatccagcacgaggcatcactctcgctgaagttctgggatgatccgactgta
gacagcttccaggctctgctcatgacgtccaaagccatgatcagaacatatgacaatgtc
tttcaactgagtgggctggtgaatttgcaggcctcttgtaagaagctttcactcctcaat
gagctcatggaccacagcgggaactatgtcctaagtgcacttcctttcattttgtccctc
ttgcaacgagggcttggagaaaggatcaaccttctggtacactcactccctcaagaccct
gagtggccggtggacagttcacctcctaagcataaggaccagccgcctttgaatattggt
ttgatgctgaaccttgaacaagctctctctgttcttgagagaggaccgccagcagataac
cccaaggcagatgagtttaggcagctgtggggctctcgctcagagttgcgacgcttccag
gacggatccatcactgaggcagtgctgtggtcagggagctccacctgtcagagacgattc
attctgctggagatcatcactcacctactacagcttcatgccgatatccctgaatcatgt
gtgagacttgtgggtggacagctggatgatgtcatcaaaattagcaaagagatgggcact
acaggagaggaggagagtctgaaggtggttcagtcttatgatgacctgagcaggaagctc
tggcagttggaggggctgccactgtctataacatccgtgcagggtgcccaccaggccttg
agatacacacaggttttccctccagttcctgtgaagctgctctattcgttttttgacaga
aagaagaaccagctcggcttagtgccacggaaggaaaaaccttgcccttgttacatcacc
cctatcaaagtcattgttcatttggagggaagtggaaaatggcccagtgagcacctggca
atacgccacatcaaggcagcttttcacatcagcttgggagaactgctttgcaagcaacac
aattacaaatgtcatgcaacacctgcctacctggatgtgtgtaaggatgggctagccttc
cgaatccaggtggcatatcacagagaaccgcagatcctgagggaaagcctgacccctgag
ggaatgctgatctacagggaaaacgctgaggcccaggcactggagctggagactcagcat
aaacctttcctaaccagcaccttgcatgggctccagcagcagcttgggtgttttggtgtc
gtgtgccgcctggctaagcgttggctggcatctcagttccttttggaatatatccaagag
gaagcagctgacctgttggtggcgtcacttttcctacatcctgcacccttcactccacca
agctctcctcaggtggggttccttcgcttccttcatttgctttccacttttgactggaaa
aacaatccccttatagtcaacctcaatggcaaactcacagctgctgaccacacagatata
aagaatgactttgtggcctctagagaatctcttcccaccatgttcatagccactcccact
gacaagaaactctctgtgtggactaaaaagacgccttctgtgcagatgcttcagcgtgct
gtcatgcttgcagcagagagtttgcgtgttttggagactcatcttattgactccagtcaa
aagcaggacatccgggtggcatttcgacctcctctggaggattatgatgttctgatccac
ctcgttccacagcaggttcctctgttagctaaagctgtggatcctcctgccatcaccttc
caaaacggcacctttagaggcgagccatccgcctcaggaggagctctgccagttatagac
tatgatccggcccgactgtatctctctgaactcagggatgcatttggagatctggctctg
tttttttatgacccatttggtggaaccgtaatcggagtgctgtggaagccaactgccttc
aagccgcaacccttcaagacatctttaatgaatgcccgccgtgtggaggtgaacggagat
gtggcaaccaccgtgccaaacatagaggccatcctgcaggatttccgcatcatcggggag
ggtctcgtcaaaaaattggaactaaggacagaaaaatgggctgtctag
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