Pimephales promelas (fathead minnow): 120472360
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Entry
120472360 CDS
T08155
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04060
Cytokine-cytokine receptor interaction
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120472360 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120472360 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120472360 (spaw)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Transforming growth factors (RSTK binding)
120472360 (spaw)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
DAN
Motif
Other DBs
NCBI-GeneID:
120472360
NCBI-ProteinID:
XP_039518453
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MPLLLFATLVVSLIHVDCVQIDSQGALVRGHHKAFAGSYSDYSLQMHPRYPLYMMQLYRD
FSGNTHTSPASVHNSTVQQADFVLSLIAQDCRQTGERWSVTFDMSSLSVSDNIHLSELRI
RLPAFSASRRVMVDVFHLRKRDCESDSVFCRLKRLFLGSIKSVPGTPASTWRVFNVTELL
QHWLSQGTETPENIPTPEDGSGEDLTELVTKSEDTGSGEGLIEPVTKSWRRKIQHPTAER
VMIVVFYKNKFSHSGQRASSLMNTVAHSKHVLLSRAQGRRHKRNRVERMRIQTDERNTTG
VEQHQGELCRRVDMWVDFDQIGWDEWIVHPKRYNAYRCEGQCPSPLDESYNPTNHAYMQS
LLKLFHPERVSCPSCVPTRLSSLSMLYYEGDGVVMRHHEDMIVEECGCH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgccactcttactgttcgccactttggtggtttctctgatacatgttgactgcgttcag
atcgatagtcaaggcgcgctcgtgagaggacatcacaaggctttcgcaggttcatactct
gactacagtctccagatgcacccgaggtacccgctgtacatgatgcagttatacagagac
ttcagcgggaacacacacacttctccagccagtgtccacaacagcactgtccagcaggcg
gacttcgtcctcagcctgattgctcaagactgtcgtcaaacaggcgagcgatggagcgtc
acttttgacatgtcttccctctcagtgagtgacaacattcatctttcagagctccgcatc
cgtctcccagcgttttctgcatccagacgcgtcatggtggacgtcttccacttgcgtaaa
cgggattgtgagtcagactcagtgttttgtcgccttaagagactttttctaggaagcatc
aagtcagtgcccggcactccagcatcaacctggagggttttcaacgtcacagagctgctc
caacactggttgagtcagggaacggagactcccgagaacatcccaacaccagaggatgga
agcggcgaagacttaacagagttggttacaaagagtgaggacactggaagcggggaaggc
ttaattgaaccggttacaaagagttggcgacgaaaaattcagcatcccacagcagaacga
gttatgattgtagtcttctacaaaaacaagttttcccacagtggccaacgggcctccagc
ttgatgaatacagttgctcactccaaacatgtcctcctgagccgagctcaaggtcgtcga
cacaagaggaaccgggtcgagaggatgcgcattcagacggacgagagaaacacgacggga
gtcgagcagcatcaaggagaactttgccggcgagttgatatgtgggtggattttgatcaa
attggatgggatgagtggatcgtgcacccgaagcgttacaatgcttaccggtgcgaaggc
caatgtccaagtccactggatgagtcgtacaacccaacaaaccacgcatatatgcagagc
ttgttgaagcttttccacccggagcgtgtgagctgcccgtcctgtgtgcccacacgcctc
agctcgctctccatgctgtattacgaaggagacggagtggtcatgcggcatcacgaggac
atgatcgtggaggagtgcggctgccactga
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